Transcript Information: S_Transcript_55500.p1


Annotated TAIR IDAT3G47910.2
Annotated Gene NameUbiquitin carboxyl-terminal hydrolase-related protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17674737-17681444 | Reverse length=1607
E-Value2.2E-307
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.264258925696
Replicate 212.237610907647
Replicate 311.427407712503
Condition 2: 8 Hour
Replicate 115.418158274349
Replicate 215.611369527921
Replicate 315.905662295036
Condition 3: 24 Hour
Replicate 113.448573070087
Replicate 212.090369992684
Replicate 312.652808227086


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55500.p1 GENE.S_Transcript_55500~~S_Transcript_55500.p1 ORF type:complete len:1509 (+),score=339.74,DUF629|PF04780.8|2.7e-154,DUF629|PF04780.8|7.2e+03,UCH|PF00443.25|1.6e+04,UCH|PF00443.25|3.9e-24,DUF627|PF04781.8|9.5e-23 S_Transcript_55500:311-4837(+)
ATGGGGAAGAAGCGAAACAATAAACCATCGCCACCACCGTCATCCACCGTTTCGCCGCAGCCGGCTCCGCCGTCAAATGAGCCGGAGGCACCGCCGTTCGATTCGGAGGAGATCAAGAACGAGTGCAAGAAAGCCGTTAACGCCTTACAAAGAGGAAACGTCAGCAAAGCGCTCCGAGTGATGAAGGACTCGAGCCAAAAGTACGTAAACTCTGCCCTAATTCACCGTGTTCACGGCCACATCTCCATAAAAGTGTCTGCACTCATCGACGATCCGAACACCAAGCAACGCCATATCCAGAACGCAATTGGATCGGCCAAACGAGCCGTTTCTCTCTCCCCTAACTCGCTCGAGTTCGCTCATTTTTACGCTAATCTTGTTTACGAATCTGCTGTCGAGAGTCGCGATTACGAGGAGGTTGTTGTTGAGTGTGAGAGAGCTTTGGCTCTTGATAACCCTATCGATCCTGCTAAGGAGAACCCTCTGTTTCTACCTGAGGAGAATAATGATTCTACTCCTGAAGCTCGGATTGCTCAGCTCCAGCAGGACCTGAGGAGCTTGATTCAGAAGTCGAATATCGCCTCCATTTCCACGTGGATGAAGAATTTGAGCGGCCAGGCTGGCGGTGAGGAGAAGTTCCGATTGATTCCGATTAGGCGGATTGAGGATTCCGTGGAGTCGAGGTATTTTCAGAGCGCTGGTGGAGCCCCTCGCCGGCCGAACGAGATCAAGAAGGCGACTAAGACGCCTGAGGAGAGGAGGAAAGAGATTGAGGTTAGGATTGCTGCTGCCAGGTTGCTTCAACAGAAGCCTGTTCCAGTTGTTCAGAGTCCTGATGATGAGAGTAGTAATAAAGCAAGTAGCGGCTCGAGCTCAGCACCTGCAACTGGTGATGGTGCTAGTGGTGGTTCTAAGGTTGGTGAGAGGAGAAGGCACTCGAGGCGAAATGATGCTAGTATTTCTGAGAGGAAAGATATGGTGACGTCGTTTTGGAACTCTATGAGTCATGAAATGAAGAGGGAGATGCTTCGGATAGGGGTTAGTGATCTTATGGCGTTTTTTCGTAATTCGTCTAGGAAAGATAGCGGGCAAGCATGTGAAATTTTGACTGAGGCATTAGGTTATGCTGAAGTGAATAAGTCATGGAAGTTTTGGGTGTGTTGTCATTGTAAGCAGAGGTTTAGGGAGGCCGAGTCTCATATGCATCACGTTGTTCATGAGCACTTGGGGAATGCTTTTCCCAAGATACAATCGGCTGTGCCTCAGGGTGTTGATAATGAGTGGGCGGAGATGCTTTTTAGTTGTTCATGGAAACCTTTGGATCTGACTGCCTCAGTTCTGATGCTTGAAGAGCAATTGAAACCTGATGATTCTGCATTTTGCGGTGTAGAGGATCCTAAGGAAGGAATTGATAACTGGGGTGACAGCTTTTGCTCTGAGGAAGGGCGGAAATCGTTAACGGAGAAGAACAGCTTGGATGATAATTTCAACGTGGATGATAAAAGTTTGATCGCTAAGTCCAAAACATGTGATGGGAAGGAGGATACCAATGCATGCATCCCAACTAGTAGTTGGCCGTCGTCAGGTGACACAGAACGAGCAAAGTTGCTTGAGAAGATTAGTTCATTGTTTGAAATCCTTGTTAGGCATAAGTATCTTGCTATGAGTCATCTGCGCAAGGTGATACAGTTTGCTATGGAAGAGTTGCAGAGTCTATTTCCTGGCTCACAGATTCTAAGATGTGGTCTGGAACAAACCTTCATATGTATATGTTTTCTGGACGCTTCCCAGCTTAGGAAGATAATCAAATTCTTGCAGGAGATATCTTTTTCTTGTGGTTTGGGTAGGTTTCCTGAGAAAATTACACCTGAAGATGCTGATACTCTCCGTCAAGACTCAGATTCTCTGGAGAGAATTGTGCTTAATGAAGATGCATCGTCCCTCATTTTGGATGAAAGTTTATTGCCTTCTGATGGCATGGTAGATGATGTGAATTCAGCTAGTCCTTCTGAGAAGGATGTCCAGTCTGGATCTGACTCACTATTGTCATGGATATACGCTGGCCTCCCTAGTGTAGAACAGTTGGCAACATGGTCTAGAATCAGAGAAGATAAAGCACGAGATGGCATTGAAGTACTGGGCATTCTCGTTAAGGAATTTGAACATCTTCAGCATCTATGTGACAGAAAATGCGAGAATTTAGCATACGAAGAAGCGTTGCACACTGTGGGGGAGCTTTTTCTGGATGAAATCAAGAAAAGGGAGCAAGGCACTGATCATTCTCATTGTAGTTACAGCTCTATCCTCAGGAAGCGCAGAGATGAGCTTGTTGAAGGTGACAATGTGATGTTTGTCGGTAATAGGTTGGAGGCGGATGCCATAACAAATGTTTTGAAGGAAGCGGAAACTATTAGTGTTGCTCAGTTTGGATATGAAGATACGTATGGTGGGGTAACTTCACATCTGTGTGACATGGAAGCCGGCGAAGATGACTGGAAATCGAGGGACTATCGTTGTCAGTTTGATTCCTGCATTGACGCTGCTCTCCAAAGACTAAAGGAGCACGTTTCTGTAGAGCTCTGCAGATACGATGCTAAAATTTTGCGGAGTGTGTCTGCCATGCAGCACTTGGAGATTAAGCTTGATCCTATTTCCGCATCTGATTATCGCTCTGTATTACTGCCTCTGGTGAAGTCATTCTTGCGGGCACACTTGGAAGAGTTGGCAGAGAAAGATGCTAGAGAGAAATCTGATGCAGCGAGTGAAGCATTTTTGGCAGAGCTGGCCCTTGATTCTAGGAAGGGCACTGCAACTGGAAATGAGAATGCAAAAAATATGCAGGAAAAGACAAAGGATAAGAGAAGAAGTAAAGATATCAGAAAAAACAAGGATATGAAGGTTGGCAGCCATAATGAGCAGCTTGAGACAACTGAACAATTCTCTATTGCAACTGCCTCTGACGGTGATCGTGTGGACTCCGAAATTGTGGTTCCAAAAAGTCCTAACATACTACAGGAGGAGTTTCGGAGGAAGATTGAACTTGAGGCTGAGGAGAGAAAGCTTGAAGAAACTTTGGAATACCAGAGACGAATAGAGAATGAGGCAAAGCAGAAGCTTCTCGCTGAGCAGCGTAAAAGAAGTGCTATAGCAGCTCCTGATGATGTTGTGGAGGAGTTTCGAGTTATGATGAAACCTGGGAGACATCATAAGCATGAACAAGTGGCATCGGAAAATATATTTGCGGACAATTTAGAAGGCATGCGAAAAACCCAGAAGGGTGACAGTGACTGTTCTGCTATTGCTGATGTGGGAGATGGTGGATCAAAAACCCTCAGACAATTACAAGCTGAAGAGGATGACGAAGAAAGGTTTCAAGCGGACATAGAGAAAGCAAAGCAGCAAAGCCTAGAATTTCAAGCGCATCGAAAGCCTTCAATGGGTTCAAATTTCAGAGTGGCACAGATGGGTACCAAAGGTGGTCACATGATGGTTGAAAATGCGAATGAAATTAGTGTAGCTGGTGCCGGGCTGCAGAATGATGTCGGTGAATACAATTGCTTTCTAAATGTGATCATCCAGTCCCTCTGGCATCTAAAACGTTTTCGGGAAGAGTTTCTGAGGAGATCAACATCAGAGCACGTTCATGTTGGGGATCCTTGTGTTGTCTGTGCATTATTTGATATCTTATCTGCATTGAGCACAGCATATGGCGACACAAGAAGAGAACCAGTAGCCCCTACTACTCTGAGGATTGCTCTGAGCAAGCTGTGCCCACAAAGTAATTTCTTTCAGGAGGGTCAAATGAATGATGCTTCCGAAGTTTTGGCTGTAATATTTGATTGCCTGCATGTGGCATTTACCTCGGGTTCAAGTGGCATGGAAAGTGATGTAGTAGAAAGTAGCAGCCCGGAGTCTTGGGATTGTGCTAATTCTGCTTGTATAGCTCACACTCTTTTGGGGATGAACATTCTTGAACGAATGAATTGCTCTAAGTGTGGAGTGGAATCCAGACAAATGAAGTACAGTTCTTTCTTTCACAATATTAATGCCAGTGCCCTCCGAACAATGAAGGTATTGTCTCCATATAGTTCATTTGATGAGCTCTTAAATCTAGTGGAGAGGAATCATCAGAAAGCTTGTGATCGAGAAGCTGGAGGATGTGGGCAATCTAACCATATCCATCACATCCTCTCAAACCCTCCTCATGTCTTCACAACAGTTTTAGGTTGGCAAACTACGCATGAGAATGTTAATGATATTGCAGCAACCCTTGCAGCCCTATCAACAGAGATAGATATCAGCATTCTTTACCGTGGTCTAGATCCAAAGCATGTGCATCGTCTAGTGTCTGTGGTTTGCTACTATGGTCAACATTATTACTGCTTTGCCTATAGTTCTGACCTTGGGAGATGGATGATGTATGACGACAGGACAGTGAAGGTAATTGGCACCTGGGATGAGGTTATATCCATGTGTGAGAGAGGGCATTTACAACCTCAGGTCCTATTTTATGAAGCTGTAAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55500.p1 GENE.S_Transcript_55500~~S_Transcript_55500.p1 ORF type:complete len:1509 (+),score=339.74,DUF629|PF04780.8|2.7e-154,DUF629|PF04780.8|7.2e+03,UCH|PF00443.25|1.6e+04,UCH|PF00443.25|3.9e-24,DUF627|PF04781.8|9.5e-23 S_Transcript_55500:311-4837(+)
MGKKRNNKPSPPPSSTVSPQPAPPSNEPEAPPFDSEEIKNECKKAVNALQRGNVSKALRVMKDSSQKYVNSALIHRVHGHISIKVSALIDDPNTKQRHIQNAIGSAKRAVSLSPNSLEFAHFYANLVYESAVESRDYEEVVVECERALALDNPIDPAKENPLFLPEENNDSTPEARIAQLQQDLRSLIQKSNIASISTWMKNLSGQAGGEEKFRLIPIRRIEDSVESRYFQSAGGAPRRPNEIKKATKTPEERRKEIEVRIAAARLLQQKPVPVVQSPDDESSNKASSGSSSAPATGDGASGGSKVGERRRHSRRNDASISERKDMVTSFWNSMSHEMKREMLRIGVSDLMAFFRNSSRKDSGQACEILTEALGYAEVNKSWKFWVCCHCKQRFREAESHMHHVVHEHLGNAFPKIQSAVPQGVDNEWAEMLFSCSWKPLDLTASVLMLEEQLKPDDSAFCGVEDPKEGIDNWGDSFCSEEGRKSLTEKNSLDDNFNVDDKSLIAKSKTCDGKEDTNACIPTSSWPSSGDTERAKLLEKISSLFEILVRHKYLAMSHLRKVIQFAMEELQSLFPGSQILRCGLEQTFICICFLDASQLRKIIKFLQEISFSCGLGRFPEKITPEDADTLRQDSDSLERIVLNEDASSLILDESLLPSDGMVDDVNSASPSEKDVQSGSDSLLSWIYAGLPSVEQLATWSRIREDKARDGIEVLGILVKEFEHLQHLCDRKCENLAYEEALHTVGELFLDEIKKREQGTDHSHCSYSSILRKRRDELVEGDNVMFVGNRLEADAITNVLKEAETISVAQFGYEDTYGGVTSHLCDMEAGEDDWKSRDYRCQFDSCIDAALQRLKEHVSVELCRYDAKILRSVSAMQHLEIKLDPISASDYRSVLLPLVKSFLRAHLEELAEKDAREKSDAASEAFLAELALDSRKGTATGNENAKNMQEKTKDKRRSKDIRKNKDMKVGSHNEQLETTEQFSIATASDGDRVDSEIVVPKSPNILQEEFRRKIELEAEERKLEETLEYQRRIENEAKQKLLAEQRKRSAIAAPDDVVEEFRVMMKPGRHHKHEQVASENIFADNLEGMRKTQKGDSDCSAIADVGDGGSKTLRQLQAEEDDEERFQADIEKAKQQSLEFQAHRKPSMGSNFRVAQMGTKGGHMMVENANEISVAGAGLQNDVGEYNCFLNVIIQSLWHLKRFREEFLRRSTSEHVHVGDPCVVCALFDILSALSTAYGDTRREPVAPTTLRIALSKLCPQSNFFQEGQMNDASEVLAVIFDCLHVAFTSGSSGMESDVVESSSPESWDCANSACIAHTLLGMNILERMNCSKCGVESRQMKYSSFFHNINASALRTMKVLSPYSSFDELLNLVERNHQKACDREAGGCGQSNHIHHILSNPPHVFTTVLGWQTTHENVNDIAATLAALSTEIDISILYRGLDPKHVHRLVSVVCYYGQHYYCFAYSSDLGRWMMYDDRTVKVIGTWDEVISMCERGHLQPQVLFYEAVN*

Click here to download the sequence:
Link to NCBI Protein BLAST