Transcript Information: S_Transcript_55515.p1


Annotated TAIR IDAT1G68990.2
Annotated Gene Namemale gametophyte defective 3
Annotated Gene Symbol(s)MGP3
Annotation TypeOrtholog
Chromosome Positionchr1:25935499-25940755 | Reverse length=983
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.206613901997
Replicate 212.568832301331
Replicate 312.832992351152
Condition 2: 8 Hour
Replicate 115.749983082643
Replicate 212.790416007656
Replicate 312.772160975925
Condition 3: 24 Hour
Replicate 19.5557476103311
Replicate 28.5536867699134
Replicate 37.5178626761943


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55515.p1 GENE.S_Transcript_55515~~S_Transcript_55515.p1 ORF type:complete len:983 (+),score=224.94,RNA_pol|PF00940.15|1e+03,RNA_pol|PF00940.15|1.5e-162,RPOL_N|PF14700.2|3.2e-83 S_Transcript_55515:192-3140(+)
ATGTGGAGAAAAGCGTTCAAGCTAGACACTTTAAGGAAGCTTAAACCCTCCTCAAATCTCACAAGGCCTAAACAATCACAATCACAATCACCTGAAGATTCAATCTTTACTAAAACCCAACATATTGGTGGGAAAAAGGGTGTTTTTCCGAGGTGCTCAATTGTGGGGTTTCGTCAAAATAATGAGACGGGTAGTTTCAAAATCAAGTCTTTGAAAAACCCTTTTGGTATTTCAGGGTTTTATGAAGGTGGTCAAGTACAACCCATATGCCATTATTATGGTACAGCTGCTGAAGCTATAGTGACAGCTTCATCAGAAGAAGATGAAGAAATGAGGGAACTAATGGAGGTTATTTGCAAACAAGAGAGTCAAAAAAAGATTCCATCTTTATTACAATCAAAAGAGCCTAAATTGATATGTGGGATGCCTCAAGGGAAGTACCATGCTCTTAGGAAGAGACAAGTGAAGATAGAGACTGAAGCTTGGGATGAAGCTGCTAAGGAGTATCAAGAGTTATTGGCTGATATGTGTGAGCAAAAGCTTGCCCCTAATTTGCCTTACATGAAGTCTTTGTTCTTGGGTTGGTTTGAGCCTTTACGGGATGCTATTAAGGCTGAACAAGATTTGTGTAAAGTGGGTAAGAATAGAGGTGCTTATGCTCCTCACTTTGATCATTTGCCAGCTGATATGATGGCTGTTATTACTATGCATAAGTTGATGGGTTTGTTGATGACTGGTAGTGGTAATGGTAGTGCCACTGTTGTCCAAGCTGCTCTCCAAATTGGTGAAGCCATTGAACATGAGGCTAGAATTCAGAGATTCTTGGAAAAACCAAAGAAAAAAACCCCACCAAACAGCATCAATGAGGATGATGCAACAAAAGCACAAGAGAGACTTAGGAAAAAGGTCACCAAATTGATGAAGAAGCAAAAAGTTCATCAGATCAGAGAAATAGTGAAGGGCCATGATGATTCAAAGCCTTGGGGCCAGGACAATCAAGTCAAGGTTGGCTGCAGATTAATTCAATTACTGATGGAAACGGCATACATACAACCTCCAGCAAGTCAGATAGGCGATGGTCCACCTGATATTCGTCCTGCATTCATTCACACCCAGAAAACTGTTATTAGAGAGGCACAAAAAGGAAGCAGAAGATATGGAGTTATAGAATGCGATCCTTTGGTACGGAAAGGTTTAGAAAGAACAGCTAGGCACATGGTGATTCCTTATATGCCAATGTTGGTTCCTCCACTGAAATGGACAGGGTATGATAAAGGAGCACATTTTTTCCTTCCATCTTACATCATGCGAACGCATGGAGCTAGGCAGCAGAGAGATGCACTGAAAAGGGTTCCAAAGCAGCAGTTAGAAACTGTATTTGAGGCTCTTGACACGTTGGGGAACACTAAATGGAGGATCAATAAAAGGGTTCTCAGTACCATAGACAGGATATGGGCTAGTGGAGGCCGCCTTGCTGACTTAGTCGACCGTGAAGATATCCCTTTACCCGAGGAACCAGATACAGATGATGCATCAGAAATTAGAAAGTGGAAGTGGAAAGTTAAAGGTGTCAAGAAAGAAAATGCAGAACGGCATTCACAGCGTTGTGATATAGAACTCAAACTAGCTGTGGCGAGAAAAATGAAGGATGAGGAGGGATTTTACTATCCACACAACCTGGATTTTCGTGGTCGTGCATACCCCATGCACCCTCATTTAAATCATCTTGGCTCTGACTTGTGCCGAGGAATTCTGGAGTTTGCAGAGGGCCGTCCTCTTGGAAAGTCAGGGCTCCGCTGGCTAAAAATACATTTGGCAAATTTATATGCTGGCGGTGTTGATAAGTTGTCCTATGAGGGTAGAATAGCGTTTACTGAGAATCATCTCGATGACATTTTTGATTCTGCGGATAGACCTCTAGAAGGAAGACGGTGGTGGTTGGATGCAGAGGATCCTTTCCAGTGCTTGGCAGCATGTATGAATCTTGCTGAAGCACTGAGAAGCTCATCTCCAGAGGATTATGTTTCACATATGCCTGTTCATCAGGATGGTTCATGTAATGGATTACAACATTATGCTGCATTGGGAAGAGACAAGCTGGGAGCAGAGGCTGTGAATCTTGTTGCAGGAGATAAACTCGCAGATGTATATTCTGGCATTGCTTCTCGAGTTCTTGAAATCATGCGCCAAGATGCACAAAAAGATCCCGCAACTGAACCTCAGGCACTTCGTGCAAAGCTTTTACTTAATCAGGTGGACAGGAAGCTGGTCAAGCAGACTGTAATGACATCAGTTTATGGTGTCACCTATGTTGGGGCACGTGATCAAATTAAAAGGAGATTGAAAGAACGTGATGCCATTGCAGATGATAATGAGTTGTTTGCAGCATCTTGCTATGCAGCTAAAACAACCATGACAGCACTGGGAGAAATGTTTGAAGCAGCACGAAGCATCATGAGTTGGCTTGGAGAATGTGCGAAGATCATAGCGTCGGAAAACCAGCCAGTGCGGTGGACCACACCTCTTGGCCTCCCTGTTGTTCAACCTTACCGGAATCTTGGCAGACGTCTTATCAAGACATCTCTTCAGGTTTTGACACTAAGGCATGAAACTGATAAGATCATGGTAAAGCGGCAGAGAACAGCTTTTCCTCCTAATTTTGTCCATTCTCTCGATGGTTCCCATATGATGATGACTGCCATTGCCTGCAAACGAGCGGGTTTAAATTTTGCAGGAGTTCATGATTCATATTGGACGCATGCAAGTGATGTTGATGAAATGAACAGAATATTAAGGGAGAAGTTCGTTGAGCTATATGAACTACCTATACTGGAGAATTTGTTGGAGAGCTTTGAGACATCATTCCCAAATTTACAGTTTCCTCCGCTTCCTGAGCGTGGAGACTTCAACTTACGAGAGGTTCTGGAGTCCCCATACTTCTTCAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55515.p1 GENE.S_Transcript_55515~~S_Transcript_55515.p1 ORF type:complete len:983 (+),score=224.94,RNA_pol|PF00940.15|1e+03,RNA_pol|PF00940.15|1.5e-162,RPOL_N|PF14700.2|3.2e-83 S_Transcript_55515:192-3140(+)
MWRKAFKLDTLRKLKPSSNLTRPKQSQSQSPEDSIFTKTQHIGGKKGVFPRCSIVGFRQNNETGSFKIKSLKNPFGISGFYEGGQVQPICHYYGTAAEAIVTASSEEDEEMRELMEVICKQESQKKIPSLLQSKEPKLICGMPQGKYHALRKRQVKIETEAWDEAAKEYQELLADMCEQKLAPNLPYMKSLFLGWFEPLRDAIKAEQDLCKVGKNRGAYAPHFDHLPADMMAVITMHKLMGLLMTGSGNGSATVVQAALQIGEAIEHEARIQRFLEKPKKKTPPNSINEDDATKAQERLRKKVTKLMKKQKVHQIREIVKGHDDSKPWGQDNQVKVGCRLIQLLMETAYIQPPASQIGDGPPDIRPAFIHTQKTVIREAQKGSRRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPLKWTGYDKGAHFFLPSYIMRTHGARQQRDALKRVPKQQLETVFEALDTLGNTKWRINKRVLSTIDRIWASGGRLADLVDREDIPLPEEPDTDDASEIRKWKWKVKGVKKENAERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLDAEDPFQCLAACMNLAEALRSSSPEDYVSHMPVHQDGSCNGLQHYAALGRDKLGAEAVNLVAGDKLADVYSGIASRVLEIMRQDAQKDPATEPQALRAKLLLNQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERDAIADDNELFAASCYAAKTTMTALGEMFEAARSIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRNLGRRLIKTSLQVLTLRHETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKRAGLNFAGVHDSYWTHASDVDEMNRILREKFVELYELPILENLLESFETSFPNLQFPPLPERGDFNLREVLESPYFFN*

Click here to download the sequence:
Link to NCBI Protein BLAST