Transcript Information: S_Transcript_55524.p1


Annotated TAIR IDAT3G45050.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 28 Blast hits to 28 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16476023-16477107 | Forward length=158
E-Value4.1E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.471105739134
Replicate 238.654007304766
Replicate 337.770723499214
Condition 2: 8 Hour
Replicate 146.745255575155
Replicate 234.721109088856
Replicate 335.640097195529
Condition 3: 24 Hour
Replicate 146.660671135909
Replicate 240.976171330036
Replicate 341.969481890113


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55524.p1 GENE.S_Transcript_55524~~S_Transcript_55524.p1 ORF type:complete len:125 (+),score=32.69 S_Transcript_55524:67-441(+)
ATGGAGTTCTTACACTTCCACTCCTCTTCCTTATTAACCTCATCCTTTAGATCAGGATCCAAGGGCTCGAAGTTGCAGGTCCACAGGAAGACATTGAGAGTATCTTCATCTCTGCCGGAAACAGTTATATCTGTGGCGGTAGCTGCTGCAATTGTTGGTGGAGCCACCACTCTTCTAATAAAAAGAACTAAAGAGTCTGAAAAGAGTCAGACTCCTGTGAAAATATGTGAAGCATGTGGGGGTTCTGGCATCTGTCCAGAATGCAAGGGAGAGGGTTTTGTGCTTCAGAAATTATCAGAGGAAAGTGCTGAGAAAGCTAGGATGACTTCTAAGAATGCTGCTACTCGTTATACATCAGGGCTTCCAAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55524.p1 GENE.S_Transcript_55524~~S_Transcript_55524.p1 ORF type:complete len:125 (+),score=32.69 S_Transcript_55524:67-441(+)
MEFLHFHSSSLLTSSFRSGSKGSKLQVHRKTLRVSSSLPETVISVAVAAAIVGGATTLLIKRTKESEKSQTPVKICEACGGSGICPECKGEGFVLQKLSEESAEKARMTSKNAATRYTSGLPRK*

Click here to download the sequence:
Link to NCBI Protein BLAST