Transcript Information: S_Transcript_55543.p1


Annotated TAIR IDAT5G22000.2
Annotated Gene NameRING-H2 group F2A
Annotated Gene Symbol(s)RHF2A
Annotation TypeOrtholog
Chromosome Positionchr5:7277436-7279553 | Forward length=375
E-Value1E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.239609652761
Replicate 249.047278324014
Replicate 348.944184221863
Condition 2: 8 Hour
Replicate 169.006775846723
Replicate 271.991461648351
Replicate 362.471830288445
Condition 3: 24 Hour
Replicate 154.724233770027
Replicate 250.209059492216
Replicate 347.663196734796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55543.p1 GENE.S_Transcript_55543~~S_Transcript_55543.p1 ORF type:complete len:390 (+),score=110.62,zf-RING_2|PF13639.2|1.5e-09,zf-RING_11|PF17123.1|1.2e-06,zf-RING_11|PF17123.1|1.8e+03,zf-rbx1|PF12678.3|3.9e-06,zf-C3HC4|PF00097.21|3.8e-06 S_Transcript_55543:312-1481(+)
ATGGAGGTTCCTAGGACTGAAGAAACCAATAAATTGGAGGAGGCCAGGTTAACCTCGGCTGCTGCTTTCGTTGAAGGTGGTATTCAAGATGCTTGTGACGATGCTTGTAGCATTTGCCTTGAGGCTTTCTGTGAGAGTGATCCTTCCACGGTGACTGGGTGTAAACACGAGTTTCATCTCCAGTGTATCCTGGAATGGTGTCAAAGGAGTTCTCAGTGCCCAATGTGCTGGCAGCCTATCACTTTGAAGGACCCTACAAGCCAAGAGCTGCTAGATGCTGTTGTGGAGGAGAGAAACCTCAGGCTCAACCCACCAAGAAATGCAGCAATTTTCCATCATCCAACATTGGGAGAGTTCGAGATACAACATTTGCCAGTTGGTGTTAATGATGCTGAACTGGAAGAGCGCATTATTCAGCACTTAGCTGCTGCTGCTGCTATGGGGCGAGCACGCCATTTTGCTAGAAGAGAAGGTCATAGGGGTAGATCATCAACTCAAGGTCGTCCACAGTTTCTAGTATTCTCTGCTCATCCAAGTGCCCAGGCTGGTGCTGTTTCACCTCCTGAAGGACTGCAAGGTGAATCTTCTCCAGGAAGCTCAGTCGCGACACCTTCTTCTCCCTTTGGAGGAGAAGCATCTCCAAGTACACCGTCACCAAATCATTCAAATCATAGAGATGTGGTTTCTTCCTCTGGAACTAGTGCCCTTGCTGCTGGTCAAAATGCATCACCATCAAGCTATGGGTCTCCTAGTCAATCCTCCCCAAGAAGTCAAGATAGAGCAGGCCCGTCAGATCTCCAATCATTTTCTGAAGCTCTGAAGTCTCGACTTAATGCAATGTCCACGAGATACAAGGAATCCATATCTAAGAGTACAAGAGGGTGGAAGGAAAGATGGTTTTCCCGCAACTCGCCTATGTCAGATATTGGTTCAGAAGTTAGAAGAGAAGTGAATGCCGGAATAGCAACTGTCTCACGTATGATGGAGCGTCTTGAAACAAGGGATGATGGAAGAACCAGCAATGATTCTGGACCTAATAGCTCACAAAGTAGCCCTGCTCGTGATCCAGGTACCCATCATGGAGCTGATTCTGTTGTTGAATCTGGAGTGAATCATTTAGCTGACAACCACACACAAGAACCATGTGCAGCACAATCTGGTTCGGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55543.p1 GENE.S_Transcript_55543~~S_Transcript_55543.p1 ORF type:complete len:390 (+),score=110.62,zf-RING_2|PF13639.2|1.5e-09,zf-RING_11|PF17123.1|1.2e-06,zf-RING_11|PF17123.1|1.8e+03,zf-rbx1|PF12678.3|3.9e-06,zf-C3HC4|PF00097.21|3.8e-06 S_Transcript_55543:312-1481(+)
MEVPRTEETNKLEEARLTSAAAFVEGGIQDACDDACSICLEAFCESDPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPITLKDPTSQELLDAVVEERNLRLNPPRNAAIFHHPTLGEFEIQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSTQGRPQFLVFSAHPSAQAGAVSPPEGLQGESSPGSSVATPSSPFGGEASPSTPSPNHSNHRDVVSSSGTSALAAGQNASPSSYGSPSQSSPRSQDRAGPSDLQSFSEALKSRLNAMSTRYKESISKSTRGWKERWFSRNSPMSDIGSEVRREVNAGIATVSRMMERLETRDDGRTSNDSGPNSSQSSPARDPGTHHGADSVVESGVNHLADNHTQEPCAAQSGSD*

Click here to download the sequence:
Link to NCBI Protein BLAST