Transcript Information: S_Transcript_55552.p1


Annotated TAIR IDAT5G05400.1
Annotated Gene NameLRR and NB-ARC domains-containing disease resistance protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1597745-1600369 | Reverse length=874
E-Value1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6521441747873
Replicate 24.253751200035
Replicate 34.3143675671148
Condition 2: 8 Hour
Replicate 18.5520845487731
Replicate 27.821520347051
Replicate 37.5619202300448
Condition 3: 24 Hour
Replicate 13.3132342569282
Replicate 23.3209184057887
Replicate 33.1122317003742


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55552.p1 GENE.S_Transcript_55552~~S_Transcript_55552.p1 ORF type:complete len:389 (+),score=64.23,NB-ARC|PF00931.18|2.5e-27 S_Transcript_55552:344-1510(+)
ATGATCGAATATCTTAATGTGATAGCACTAGTGTTGCTGCCCATCATAGCAGCACTGATGAGAAGGGAGGAGCTGAACCTCGACAAAATATCAGAACGAATCACCTTTATGAAGGATGTACTTGAATTTATTGGCAAATTCCCCAGTTGGGCTGAGTATTGTAATGATCTCATTGCTAATGTTCAATATCTCAGGGACAGAAGGACCAGGTTGGAGACTCGAATGGATGATCTGAGAATGCGCATTGAAGAAGAGGAGAATCGGACTGGTAGGCAAAAGAAGAGAGAAGTCGATAACTGGCTAACTACTTCTGCAACTAAAGACAATGAGGTCCAGGCACTACTCGATCAAATCGATAGCATTAGAGGAACATATCTTCTTTCAAGGTTTCTCTATCGAGCATGGTGGGGAAGCCAAGCACAGAGAAAGATTAAAGAGGTTGATGAACTATATGATTTAGGAGTATTCAAAGAAGTACTATCCCCTACTAGAGAAAAATTGGAAAGAGTGGTAAGACCATTGGTGGGCAAAGCAGCAGATGAGAATATCAGGGAGATAATGCGCTTGTCAAGACCAGAGAGTGGCATCACCACAATCGGAGTTCATGGGGTTAAAGGAATAGGAAAAACAGAAATCATGAACCACATCCATAACCAGCTACTAAGAAATGGTAACCCGCGTATTTATATGGTTGAAGCTCCTGAAGACTCTACAGAGTATGATCTGCAGAAATGCATTGCAAATGAGCTAGAACTTGATCTACAGGAAGAAGTAAACAAAAGAGCAGCACTGCTGAATAGGGCGTTGAGGAGAGGAAAATTTGTGTTAATTTTAGATGGTTTGAATAAGTATTTTGCAGTGGAAGACGTAGGTATTCCTCTGGATGCAATGCAAGGGAAACTGATTATCACTTCTCGATCTCCTGACGTGTGTAGAAGGATGGGTTGTCAGAAAACTGTTGCAGTTGAGCCCCTCCCATCAGATGATGCATTAGAACTTTTCAAGCGAAAGGTTGAACTAGGTTCATCTTTCCAGCCTCCAATCGAAGGTGTTGCGATAGAGATTGTCAGGAATTGTCTAGGTGTGCCTTCACGAATCATTAAAGAGGCAATCCATATGAGGGGACAACATGACATTAGTGTGTGGGAGACGTATCTCAATGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55552.p1 GENE.S_Transcript_55552~~S_Transcript_55552.p1 ORF type:complete len:389 (+),score=64.23,NB-ARC|PF00931.18|2.5e-27 S_Transcript_55552:344-1510(+)
MIEYLNVIALVLLPIIAALMRREELNLDKISERITFMKDVLEFIGKFPSWAEYCNDLIANVQYLRDRRTRLETRMDDLRMRIEEEENRTGRQKKREVDNWLTTSATKDNEVQALLDQIDSIRGTYLLSRFLYRAWWGSQAQRKIKEVDELYDLGVFKEVLSPTREKLERVVRPLVGKAADENIREIMRLSRPESGITTIGVHGVKGIGKTEIMNHIHNQLLRNGNPRIYMVEAPEDSTEYDLQKCIANELELDLQEEVNKRAALLNRALRRGKFVLILDGLNKYFAVEDVGIPLDAMQGKLIITSRSPDVCRRMGCQKTVAVEPLPSDDALELFKRKVELGSSFQPPIEGVAIEIVRNCLGVPSRIIKEAIHMRGQHDISVWETYLNA*

Click here to download the sequence:
Link to NCBI Protein BLAST