Transcript Information: S_Transcript_55553.p1


Annotated TAIR IDAT5G05400.1
Annotated Gene NameLRR and NB-ARC domains-containing disease resistance protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1597745-1600369 | Reverse length=874
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5770667398625
Replicate 20.98056842477844
Replicate 31.3661285987852
Condition 2: 8 Hour
Replicate 11.8955902504118
Replicate 21.8228913706444
Replicate 31.4210565069988
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20.67152034300288
Replicate 30.93414979278208


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55553.p1 GENE.S_Transcript_55553~~S_Transcript_55553.p1 ORF type:internal len:135 (+),score=26.42,NB-ARC|PF00931.18|8.2e-18 S_Transcript_55553:3-404(+)
GGACTTGATCTACAGGAAGAAGATGTAAACAAAAGAGCAGCACTACTGAATAGGGCGTTGAGGAGAGGAAAATTTGTGTTAATTTTAGATGGTTTGAATAAGTATTTTGCAGTGGAAGACGTAGGTATTCCTCTGGATGCAATGCAAGGGAAACTGATAATCACTTCTCGATCTCCTGTCGTATGTAGAAGGATGGGTTGTCAGGAAACAGTTGCAGTTGAGCCCCTCCCATCAGATGATGCATTAGAACTTTTCAAGCGAAAGGTTGAACTAGGTTCATCTTTCCAGCCTCCAATCGAAGGTGTTGCGATAGAGATTGTCAGGAATTGTCTAGGTGTGCCTTCACGAATCATTGCAGAGGCAATCCATATGAGGAGAGAACATGACATTAGTGTGTGGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55553.p1 GENE.S_Transcript_55553~~S_Transcript_55553.p1 ORF type:internal len:135 (+),score=26.42,NB-ARC|PF00931.18|8.2e-18 S_Transcript_55553:3-404(+)
GLDLQEEDVNKRAALLNRALRRGKFVLILDGLNKYFAVEDVGIPLDAMQGKLIITSRSPVVCRRMGCQETVAVEPLPSDDALELFKRKVELGSSFQPPIEGVAIEIVRNCLGVPSRIIAEAIHMRREHDISVWE

Click here to download the sequence:
Link to NCBI Protein BLAST