Transcript Information: S_Transcript_55560.p1


Annotated TAIR IDAT3G13677.1
Annotated Gene Nameunknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4476296-4477092 | Forward length=171
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.769557354954
Replicate 235.409415339221
Replicate 340.300793664164
Condition 2: 8 Hour
Replicate 148.706138378637
Replicate 255.515328105988
Replicate 342.631695209963
Condition 3: 24 Hour
Replicate 144.498836740099
Replicate 239.451820151419
Replicate 339.857057825369


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55560.p1 GENE.S_Transcript_55560~~S_Transcript_55560.p1 ORF type:5prime_partial len:81 (+),score=26.69 S_Transcript_55560:3-245(+)
AGCATGCTCCAACACAGTGGAGCAACCACTCATGCTAAAACTCAATGGAAGCAAATGGGGGAAGACGAGAAGAAGGTGGCTGTCCATGAAGAGATGAAAAGGATGCATCAACTTCCTGCCAACAGTAGCTATGCTGCTCATCGTCTTCATGTTCTGAACAAAATACTGCAGCTCATGTCCGTCAAGAGATCTGCATCAGAAGAAGAGGAATTGGAGTTGCTTTTCGCTGGCTTGTCGCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55560.p1 GENE.S_Transcript_55560~~S_Transcript_55560.p1 ORF type:5prime_partial len:81 (+),score=26.69 S_Transcript_55560:3-245(+)
SMLQHSGATTHAKTQWKQMGEDEKKVAVHEEMKRMHQLPANSSYAAHRLHVLNKILQLMSVKRSASEEEELELLFAGLSL*

Click here to download the sequence:
Link to NCBI Protein BLAST