Transcript Information: S_Transcript_55588.p1


Annotated TAIR IDAT5G64160.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25670941-25672318 | Forward length=227
E-Value6.8E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5161603952577
Replicate 27.3542631858383
Replicate 35.5738046830437
Condition 2: 8 Hour
Replicate 18.6249356393738
Replicate 26.960130687915
Replicate 38.5263390419925
Condition 3: 24 Hour
Replicate 15.5340371509505
Replicate 25.6407708812242
Replicate 33.8113311545509


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55588.p1 GENE.S_Transcript_55588~~S_Transcript_55588.p1 ORF type:complete len:225 (+),score=53.22 S_Transcript_55588:69-743(+)
ATGAGCTTGGCACTAATACAAGGTTACTCATCTGCAGAAGAACAAGAAGAAGCAATCCATCACTATGACAACTTCTCCTCCGATGACACTGACGATGAAAACGACGACACAAACGACTCCGTTTCATCATCAAGAAGGAAGTTACCAACATCCTATAACCCAGTAGCTGCCCCTAAAACCCTACCCGGATCTGCCCTTCCTTCTGCCCTTGACGCCTTTTCCGAAGTTTCAGGTCCACCACAGTTCCTGAACAATTGTGTAGAGGATCAGCATTTGGGCAAAGAGAATGATGGGCTTCCTCACCATAGAGGTCGTAGAAGGAATAGAGACAAGAAAGACTTACCTGCTGGTGCTGTTGTGGAGGCCAAAGCCCAATTAGTGGGAATTCATGAGCGAGTCAGGAGTGATATTGAGGGAACAGCAGCTTCAAACCAACCCCAGACAGCTTCAACAACAGGCAGTCAGCCTCAACCAAGTATGTGCTTGCAATGCGGAATACCCAAAGTCTACTCTGGTGCCCGTGGGATGTTTTGTCCTGTATGTCCTGCAGACGATAGCAAGAAGAAGGGATCTACTGTTAAGGACAAAGAGAAGAGCAAGAGGATGAAAGGCCAATCTTCCCATGCAACTTGGAAAAGCGAAACAGAGATGCAACTACGACAGCATTTTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55588.p1 GENE.S_Transcript_55588~~S_Transcript_55588.p1 ORF type:complete len:225 (+),score=53.22 S_Transcript_55588:69-743(+)
MSLALIQGYSSAEEQEEAIHHYDNFSSDDTDDENDDTNDSVSSSRRKLPTSYNPVAAPKTLPGSALPSALDAFSEVSGPPQFLNNCVEDQHLGKENDGLPHHRGRRRNRDKKDLPAGAVVEAKAQLVGIHERVRSDIEGTAASNQPQTASTTGSQPQPSMCLQCGIPKVYSGARGMFCPVCPADDSKKKGSTVKDKEKSKRMKGQSSHATWKSETEMQLRQHFD*

Click here to download the sequence:
Link to NCBI Protein BLAST