Transcript Information: S_Transcript_55632.p1


Annotated TAIR IDAT2G46020.2
Annotated Gene Nametranscription regulatory protein SNF2, putative
Annotated Gene Symbol(s)CHR2, ATBRM, BRM, CHA2
Annotation TypeOrtholog
Chromosome Positionchr2:18923304-18931769 | Forward length=2193
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.214636091292
Replicate 219.581228072676
Replicate 320.575912297278
Condition 2: 8 Hour
Replicate 124.937888130418
Replicate 224.898359779368
Replicate 324.654942129623
Condition 3: 24 Hour
Replicate 125.306640983639
Replicate 219.970161839814
Replicate 319.720514682871


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55632.p1 GENE.S_Transcript_55632~~S_Transcript_55632.p1 ORF type:complete len:2196 (+),score=565.86,SNF2_N|PF00176.19|5.1e-67,Helicase_C|PF00271.27|1.5e-17,Helicase_C|PF00271.27|4.9e+03,QLQ|PF08880.7|1.6e-09,ResIII|PF04851.11|1.4e-06 S_Transcript_55632:338-6925(+)
ATGGATAAGGATAATCCTTCTCAGTCATTACAGCATCCACTTCTGAGAAAACCTGAAGGAAATGAAACGATTATAGCATTTCAAGGAGGTGGTGGACCGGGTGGTCTTCAGGGTGTCATGGGAGGGGGGAATTTTGTTGGGTCTCCAAACTCGTTGCAGTTTTCACAGTCGAGGAAAATGCCTGATGTTTCCCAGCAGCAGCAGCACGGCCCCCCTCATATGCACGAAGAAGGTCAAAGTAAAAGCCATGTTCATGAGCAACAAGTTTATAATCCTGTCCATCAAGCTTATTTGCAATACCAACTCCAGCAAAAGTCTGCCATGGGGTTGCAGCATCAGGGTCAGGGGCAACCCAAATTGGGAATGTTGGGGTCTTCATCGGGAAACAATATGAAAATGCAAGACCTTGTTTCAATGCAGGCAAACAACCAGGCCCAGGCAGCATCGAAGAAACCATCTGAGCCTTTTGGTCGTGTTGAGAGACAGATGGAGCAAGGCCAACAAGGTGGTTCTGATCAGAGGAACGAATCAAAGCCTCCTATGATGCAAACAACAATGGGACATCCATTGGGTGCAAATATGATGAGGCCGATGCAACATCCTCAGATTCAGCCTGGGATGCAAAGCATGGCAAATAATCAGATGGCGGTGGCTGCCCAACTGCAGGCATGGGCACTCGAACGAAATATTGATTTATCTCAACCTCAAAATGCCAACTTGGTGGCTCAACTTATGCCTTTCGTGCAATCTAGGATGATGGCACAGCAAAAGGCAAATGAAGGCCAGTCATCTCCCGTCCCTTTGCAAAGACAGCAGGTTGCTTCTCCACCAGTTGCTGCTGAAAACTCACCTCGTGCTAATTCGTCAAGTGAAGTTTCTGGGCATTCAAGCTCCTCCAGAGCTAGGCAAACAGCTCCATCAGGACCTTTTGGCTCAGCTTCTAATGCTGGGATAGTTCACAATTCTAACAATTTGCCAGCACAGTTCTCTGGTCATGGTAGAGAGAATCAGGCACCTCAAATGCAGCCTGTGATGGGGGGAAGTGGAATGCCTTCTGTTCAGGCAGCCCGACCTTCAGTGAACTTGAAACAAGGTTTGGAAAATACACTGCATATGAAAAATGCAGCAGCTACCCAAGACACATTGCAAATGCAGTATCTCAGGCAGATGAATCGGTCTTCTCCTCAACCTGCTGGAACATCTAGTGATGGAGGCTCAGGAAATCTTCCGCCATCCCAATCTCAGCTACCATCCCACCCTCAGCAACCCTCCCAGTCTCAGCAATCCTCCCAGAGCTCACAACTGCAGTCTGGGTTCACAAAGCAACAACTGCATGTTCTCAAAGCGCAAATACTTGCCTTTAGACGCCTGAAGAAAGGGGAAACTACTCTTCCACAAGAACTGTTACGTGCGATTGTTCCACCACCTCTTGAGACACAAGGGCAGCAACCCCCAGTTCCTGCTGGTTCTACTAATCAGGATAATTCTTCCACCAGGATTGTTGATGTAAGTCCAAAGCAATTAGAGTCTAATGAGAAAGGTCCACAGGCTCCATCCCCTGCAGCCTTGAAAAATGTATCCAGAGAGGAAGCTTCACTTGATGAAAAGGCAACTAGCTTGACAACAAATACGCCTGTTGCAACATCTGTCACCAGAGAGCCTTCTTCAAATATATCTTCTGGAAAGGAAGACCAGCAATCTACCCCAATTGTTGTTAAGCCTGAACAAGATGTTGAACACAGTGTACAGAAAACTCCTATTAGAAATGACTTGAGTATGGATAGGGGAAAGGCTATCGCAGCACAAGGTTCTGCAGCTGAAACTAAGAAGCCCATCCAAGCAGGTCCACCATCCCAGGCAAAGGATATCAGTTCCACCAGAAAGTATCATGGTCCATTGTTTGATTTCCCATGTTTTACTAGAAAACATGACTCTCTTGGTTCTGCAGTGGTAGCAAACAACAATTTATCTTTGGCTTATGACATCAAAGATCTTCTAATTGAGGAAGGCATCGAGATGATTAACAATAAGAGGGAACAGAACTTGAAGAAGATTGGTGGCTTGTTAGCTGTTAACTTAGAGAGGAAAAGGATCAGGCCAGATCTTGTTGTGCGGCTGCAAATTGAAGAAAAAAAACTTAAGCTGTTAGACATTCAGACACGTCTGAGGGATCAAGTAGATCTAGAGCAGCAGGAAATAATGGCTATGACTGACAGGGAATATAGGAAATTTGTCCGGATATGTGAGCGACAACGCTTGGAACTTTTGAGGCAAGTTCAAGCTTCTCAGAAAGCTACGAGAGAAAAGCAGCTGAAATCAATATTTCTGTGGCGAAAGAAGCTCCTTGAGACACATTGGGCTATCCGTGATGCAAGGACTGCCCGTAACAGAGGTGTTGCAAAATATCACGAGAGGATGCTTAGGGAGTTTTCAAAGAGAAAGGATGATGATAGGAATAAGAGAATGGAGGCCTTGAAAAATAATGATGTTGAAAGATACAGGGAAATGCTTCTGGAGCAGCAGACGAGCATTCCAGGTGATGCTGCTGAGAGGTATGCTGTTCTCTCAACATTTTTGACTCAGACGGAAGAATACCTTCACAAACTGGGGAGCAAGATAACGGCTGCCAAAAGTCAGCAACAGGTTCAGGAAGCAGCTGCAGCGGCAGCTGCCGCTGCTCGAGCTCAGGGTCTATCAGAAGAAGAAGTTAGAGCTGCAGCTGCTTGTGCTGGCGAGGAAGTAACGATAAGAAATCAGTTCTCTGAAATGAATGCGCCGAAGGATAGTTCATCAGTCAACAAGTATTACAGTCTTGCACATGCTATAAATGAGAGGGTTTTCAGACAGCCGTCAATGTTAAGGGCTGGAACACTGCGAGATTATCAGCTTGTTGGGTTACAATGGATGCTTTCTTTGTATAACAACAAGCTGAATGGGATTTTGGCAGATGAAATGGGTCTTGGGAAAACTGTACAGGTGATGGCATTGATTGCTTACTTGATGGAGTTTAAAGGGAACTATGGCCCTCATCTAATTATAGTCCCTAATGCTGTTCTAGTGAATTGGAAGAGTGAATTACATACTTGGCTGCCAGGTGTGTCGTGCATTTACTATGTTGGTGGAAAGGATCAAAGGTCCAAATTATTTTCTCAAGAAGTTCTTGCTATGAAATTTAATGTTCTTGTCACAACCTATGAGTTTATTATGTACGACCGTTCAAAACTTTCTAAAGTTGATTGGAAATATATCATAATTGATGAAGCACAAAGAATGAAGGATAGAGAATCAGTTCTAGCTCGTGATTTGGACAGATATCGCTGTCAAAGGCGTCTTCTACTTACAGGGACACCTTTACAGAATGATTTGAAGGAGCTTTGGTCTCTACTTAATTTACTTCTTCCGGAGGTATTTGACAATCGCAAAGCATTCCATGATTGGTTCTCACAGCCCTTTCAAAGGGAAGGTCCTACACATAATGCAGAAGATGATTGGCTCGAAACTGAAAAAAAGGTTATTATTATCCATAGGCTCCATCAGATTTTGGAGCCATTTATGCTCAGACGGCGTGTTGAAGATGTGGAAGGCTCTCTCCCTCCCAAGGTGTCTTTTGTTCTGAAATGTAAGATGTCTGGTATCCAAGGCGCTATATATGATTGGGTTAAAGCTACTGGCACACTTCGTGTGGACCCAGAAGATGAGAAGATTAGGATTCAAAAGAATCCATATTACCAGGCTAGGACTTATAAAACTTTAAATAATAGGTGTATGGAGCTACGAAAAGTTTGCAATCACCCTTTGCTGAATTATCCATATTTTAGTGATTTGTCAAAGGATTTCCTGGTAAAATCTTGTGGGAAGTTATGGATCTTGGATAGAATCCTCATAAAACTTCAAAAATCAGGGCATCGAGTGCTTCTCTTTAGTACCATGACCAAGCTACTTGATATACTGGAGGAGTATTTGCAATGGAGGCGGCTTGTTTATCGGCGAATTGATGGAACAACTAGCTTGGAAGACCGTGAATCAGCCATCGTGGACTTCAATGACCCAGAGTCAGAGTGCTTTATCTTTCTGCTGAGTATTCGTGCTGCTGGACGTGGTTTAAATCTTCAAACTGCTGACACTGTCATTATATATGACCCTGATCCCAACCCCAAGAATGAGGAACAGGCAGTTGCCAGAGCTCATCGCATTGGGCAAACCCGGGAAGTAAAAGTCATTTACATGGAAGCTGTGGTTGACAAAATAGCCAGTCATCAAAAGGAGGATGATTTCAGAATTGGAGGTACAGTAGACTTAGAGGATGATCTAGCAGGAAAGGATCGGTATATTGGCTCAATTGAGAGCCTTATACGAAATAACATCCAACAGTATAAAATTGACATGGCTGATGAAGTAATCAATGCTGGGCGTTTTGATCAGAGGACAACACATGAGGAGAGACGGATGACTTTAGAAACATTACTGCATGACGAGGAGAGATATCAAGAAACAGTTCATGATGTCCCCTCTCTGCAGGAGGTCAATCGAATGATTGCACGGAGTGAAGAAGAAGTTGCACTCTTTGATCAGATGGATGAAGACTTTGATTGGGCTGAGGAGATGACCAGGTATGATGAAGTACCGGAATGGCTTCGTGCCAGTACAAAGGAAGTTAATGCTGCCATTGCTTCTTTGTCCAAAAAGCCATCGAAGGACATCTTTAATAGCACTTTGGTAGTGGAGGGTGAAACTGATAGGAAGAGGGGTCGGCATAAGGGGAAGAAATTTCCTGTGTACACTGAGTTGGATGATGATAATGGAGAATCTTCTGATGCTAGTTCTGAAGACAGAAATGGATATTCAGCCCATGATGAGGAAGGTGAAATTGGAGAATTTGAAGACGAAGAAGAGGATGGAGCTGCTGCAGCCAATAAGGATAAGTTAGAAGAGGAGGCTCCTCTTTGTAATGGTGGGTATGATTACCCTCGAACTAGTGGAAGCACCAGAACTGGCCATATGATTGAAGAACCTGGATCTCCTGGTTCATCCTCTGATAGTCGCAGAATGGCACGAACAGTCTCACCGTCTGTGTCTTCCCAGAAGTTCACTACGCTGTCAGCTATAGATGCTAGGCCAAGTTCTGGCTCAAAAAGACTGTCTGATGAGCTAGAGGAAGGGGAAATTGCTGTATCTGGAGATTCACATCTGGATGTTCAGCAATCAGGAAGTTGGAATCATGAGCGTGAAGAAGGTGAAGATGAACAGGTGGTGCAACCCAGAATCAAACGGAAGCGAAGTATAAGACTTCGACCACGGCACACCATGGAAAGGTCCGAAGAAAGGTACAGCAATGAGAAGCCAACTCTTCAACGTGGAGACTCATTTCAATCTCAATTTATTACAGATCAGAAATTTGGAACTCAACTAAGGATTGAGCCTGAGTCCAAAAAGTTGGGGGATTCTGCTGCTATTAAGCAAGATCGAGGTGACTTGTCTTCAAAAACTCGCCGCAGCTTGCCTTCTAGAAGGACTGGAAGTACATCAAAGCTGCATGGGTCTGCAAAAGCTGGTAGACTGAATAGCCTGTCCACTCCCAGCGATGATGCTGTTGAGAACTCTCGAGACAGTTGGGATGTTAAAGATATGAACATGTCTGCAAATCCCAACTATGGGGTGAAGATGTCTGATGCTGTCCTTAGGAAGTGCAAAAGTGTGATTAGCAAAGTCCAACGGAGAATAGACAAGGAAGGGCCTCAAATTGTACCTTTGCTGACTGATCTGTGGAGAAGACCTGATAGCTCTGGCTACACAAATGGACCAGCAAACAAACTTTTGGATTTGCGTAAGATCGACAATCGAGTTGACAGACTTAACTATAGTGGGATAATGGAATTTATTAATGATGCACAATCGATGCTGAAAAGTGCTGTGCAGTATTATGGTTTCTCACATGAGGTTAGATGTGAAGCAAGGAAGGTGCATGATCTGTTTTTTGATATTTTGGCTATGTCTTTCCCCGACATTGATTTCCAGGACGCCAAAAATGCAATGTCCTTTTCTGGCCCAACAGCGTCAACTTCATCTTCTGCTTTGAGATCAGCTGCTGGACCCCAAGGTAGAAAGCATAAACTGATGAATGATGTAGAGCGAGAGATGAGCCCATCACCAAGGCAATCAATTCGAGGGCCAGCTACTATCAATGAAGAAATGAGGATGACGAGATCTCATTTGCCCGTAAAGGAATCAAGACTTGGCAGCAATGCCAGCAGCAGCCGGGACCAAGGGCAGCAGCATGATGAGTCTCCCATGCTGACCCATCCTGGAGATTTGGTAGTTTGCAAGAAAAAGAGGAAAGACAGGGAGAAGCCTACTGTGAATACTAGGTCTGGGTCGTCGGGGCCTGTTTCACCCTCTAGCATGGGACGTAGTATTAGGAGCCCTGGTTCAGCATCTACTCCAAGGGAAACCAGATCATCCCAACAGCAAGTTTGGTCGAATCAGTCACAACAGGTTAATGGAAGCAGTGGTGGAGGAACCGTTGGTTGGGCCAACCCTGTAAAGAGATTGAGGACAGATGCTGGGAGGCGACGGCCAAGCATTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55632.p1 GENE.S_Transcript_55632~~S_Transcript_55632.p1 ORF type:complete len:2196 (+),score=565.86,SNF2_N|PF00176.19|5.1e-67,Helicase_C|PF00271.27|1.5e-17,Helicase_C|PF00271.27|4.9e+03,QLQ|PF08880.7|1.6e-09,ResIII|PF04851.11|1.4e-06 S_Transcript_55632:338-6925(+)
MDKDNPSQSLQHPLLRKPEGNETIIAFQGGGGPGGLQGVMGGGNFVGSPNSLQFSQSRKMPDVSQQQQHGPPHMHEEGQSKSHVHEQQVYNPVHQAYLQYQLQQKSAMGLQHQGQGQPKLGMLGSSSGNNMKMQDLVSMQANNQAQAASKKPSEPFGRVERQMEQGQQGGSDQRNESKPPMMQTTMGHPLGANMMRPMQHPQIQPGMQSMANNQMAVAAQLQAWALERNIDLSQPQNANLVAQLMPFVQSRMMAQQKANEGQSSPVPLQRQQVASPPVAAENSPRANSSSEVSGHSSSSRARQTAPSGPFGSASNAGIVHNSNNLPAQFSGHGRENQAPQMQPVMGGSGMPSVQAARPSVNLKQGLENTLHMKNAAATQDTLQMQYLRQMNRSSPQPAGTSSDGGSGNLPPSQSQLPSHPQQPSQSQQSSQSSQLQSGFTKQQLHVLKAQILAFRRLKKGETTLPQELLRAIVPPPLETQGQQPPVPAGSTNQDNSSTRIVDVSPKQLESNEKGPQAPSPAALKNVSREEASLDEKATSLTTNTPVATSVTREPSSNISSGKEDQQSTPIVVKPEQDVEHSVQKTPIRNDLSMDRGKAIAAQGSAAETKKPIQAGPPSQAKDISSTRKYHGPLFDFPCFTRKHDSLGSAVVANNNLSLAYDIKDLLIEEGIEMINNKREQNLKKIGGLLAVNLERKRIRPDLVVRLQIEEKKLKLLDIQTRLRDQVDLEQQEIMAMTDREYRKFVRICERQRLELLRQVQASQKATREKQLKSIFLWRKKLLETHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKSQQQVQEAAAAAAAAARAQGLSEEEVRAAAACAGEEVTIRNQFSEMNAPKDSSSVNKYYSLAHAINERVFRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPGVSCIYYVGGKDQRSKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQREGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSFVLKCKMSGIQGAIYDWVKATGTLRVDPEDEKIRIQKNPYYQARTYKTLNNRCMELRKVCNHPLLNYPYFSDLSKDFLVKSCGKLWILDRILIKLQKSGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPESECFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKIASHQKEDDFRIGGTVDLEDDLAGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSEEEVALFDQMDEDFDWAEEMTRYDEVPEWLRASTKEVNAAIASLSKKPSKDIFNSTLVVEGETDRKRGRHKGKKFPVYTELDDDNGESSDASSEDRNGYSAHDEEGEIGEFEDEEEDGAAAANKDKLEEEAPLCNGGYDYPRTSGSTRTGHMIEEPGSPGSSSDSRRMARTVSPSVSSQKFTTLSAIDARPSSGSKRLSDELEEGEIAVSGDSHLDVQQSGSWNHEREEGEDEQVVQPRIKRKRSIRLRPRHTMERSEERYSNEKPTLQRGDSFQSQFITDQKFGTQLRIEPESKKLGDSAAIKQDRGDLSSKTRRSLPSRRTGSTSKLHGSAKAGRLNSLSTPSDDAVENSRDSWDVKDMNMSANPNYGVKMSDAVLRKCKSVISKVQRRIDKEGPQIVPLLTDLWRRPDSSGYTNGPANKLLDLRKIDNRVDRLNYSGIMEFINDAQSMLKSAVQYYGFSHEVRCEARKVHDLFFDILAMSFPDIDFQDAKNAMSFSGPTASTSSSALRSAAGPQGRKHKLMNDVEREMSPSPRQSIRGPATINEEMRMTRSHLPVKESRLGSNASSSRDQGQQHDESPMLTHPGDLVVCKKKRKDREKPTVNTRSGSSGPVSPSSMGRSIRSPGSASTPRETRSSQQQVWSNQSQQVNGSSGGGTVGWANPVKRLRTDAGRRRPSIL*

Click here to download the sequence:
Link to NCBI Protein BLAST