Transcript Information: S_Transcript_55741.p1


Annotated TAIR IDAT5G49710.3
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20195561-20197188 | Forward length=235
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31309413217859
Replicate 20.51912446017682
Replicate 30
Condition 2: 8 Hour
Replicate 10.25088694490745
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55741.p1 GENE.S_Transcript_55741~~S_Transcript_55741.p1 ORF type:5prime_partial len:85 (-),score=14.28 S_Transcript_55741:24-278(-)
GGGAGGAGAGAGAAACAGAAAGATAAAGAACAACTCAGAGTTAAAAGGAAGACTTTAAAGGCTGTGCTTGAGCAGTGTCAAAGAGCTCTCGAATCCCTAGACATCGATTCTTCCGAACAAGACGATGACGACGATAATATTACCGATGATGACGTTGATCGTCAGGGATTTGACGACAGAGAGTCTTGTGATGGATCGTCTTCTCCCTGTACAGTTCGTGAGGCCGAACAAGTAAGCCCCTTTCACTTCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55741.p1 GENE.S_Transcript_55741~~S_Transcript_55741.p1 ORF type:5prime_partial len:85 (-),score=14.28 S_Transcript_55741:24-278(-)
GRREKQKDKEQLRVKRKTLKAVLEQCQRALESLDIDSSEQDDDDDNITDDDVDRQGFDDRESCDGSSSPCTVREAEQVSPFHFN*

Click here to download the sequence:
Link to NCBI Protein BLAST