Transcript Information: S_Transcript_55784.p1


Annotated TAIR IDAT3G01480.1
Annotated Gene Namecyclophilin 38
Annotated Gene Symbol(s)CYP38, ATCYP38
Annotation TypeOrtholog
Chromosome Positionchr3:188569-190674 | Forward length=437
E-Value6E-233
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 183.707854105369
Replicate 2102.5385153444
Replicate 3127.18988255012
Condition 2: 8 Hour
Replicate 1109.91500736143
Replicate 2113.73177678522
Replicate 3114.1853334258
Condition 3: 24 Hour
Replicate 1100.41910097989
Replicate 2110.6732825215
Replicate 3105.66592171483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55784.p1 GENE.S_Transcript_55784~~S_Transcript_55784.p1 ORF type:complete len:454 (+),score=110.36,Pro_isomerase|PF00160.17|8.1e-25 S_Transcript_55784:228-1589(+)
ATGTCTTCTATTATGTACCACCATTGCTGTCCTTCAATTGGCAGCTCAAAACTTTCCTTCCCCAAATCCCCAACTACATTTCTTAATCCGGGTTCGGCTAATTGTCCCAAAAATGTTCGTTTTCGGAAGTGGGGTCCTCATTGTTGCTCCAATGACTCGCGTCAGATTGTTTTCAATGACCCACAAAAAAAGAAGCCCTTTTCGTTGAAAGAATGTGCCATTTCGATTGCATTAGCAGTTGGGTTAATAACTGGATCGCCTGCTTTGAATTGGCAAACTGATGCCGTAGCAGTTACTACTCCCCCAGCACTGCCAGATTTGGCTGTTCTAATCTCTGGTCCACCAATCAAGGATCCAGGAGCCCTTTTGAGATATGCATTGCCCATTAACAATAAGGCTATTAGAGAAGTTCAGAAACCGTTGGAAGATATCACGGATAGTCTCAAGGTTGCAGGGCTTAAAGCTCTTGATTCTGTTGAGAGGAACATAAAGCAGGCTTCTCGTGCACTTAAGAATGGCAAGAATGACATAATTTCAGGATTGGCTGAATCAAAGAAAGACCGTGGGATTGAGTTGCTCGACAAGTTGGAAGCTGGACTGGGTGAACTTCAACAGATTGTGGAGGACAGGAATCGGGATGGGGTTGCACCTAAACAGAAGGAGTTGCTTCAATATGTTGGCAGTGTTGAAGAGGACATGGTTGATGGATTTCCATATGAAGTTCCGGAAGAGTACCAAAGTATGCCTCTCTTGAAGGGAAGGGCCACTGTAGATATGAAGGTCAAAGTGAAGGACAACCCAAATCTTGAAGACTGTGTCTTTCGCATTGTGCTGGATGGTTATAATGCCCCAGTAACTGCTGGCAATTTTGTGGATTTGGTGCAAAGACACTTTTATGATGGCATGGAGATCCAAAGAGCTGATGGCTTTGTTGTGCAAACTGGAGATCCAGAAGGTCCTGCCGAGGGTTTTATTGATCCCAGTACAGAAAAACCTCGTACAATTCCATTGGAAATCATGGCGGAAGGAGAAAAAACTCCATTTTATGGGTCAACCTTAGAAGAGCTTGGTTTATACAAGGCTCAAACAAGGCTTCCATTTAATGCCTTTGGTACGATGGCCATGGCGAGAGAAGAATTCGAGAATAATTCTGCTTCCAGCCAGATATTTTGGTTGTTGAAGGAAAGTGAACTAACGCCCAGTAACGCCAACATATTGGATGGCCGATACGCAGTGTTTGGTTATGTAACAGATAATGAAGATTTTTTGGCAGATCTCAAGGTTGGTGATGTCATAGAGTCCATGCAAGTTGTGTCTGGCCTTGATAATCTTGTGAATCCAAGCTACAAGATTGCTGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55784.p1 GENE.S_Transcript_55784~~S_Transcript_55784.p1 ORF type:complete len:454 (+),score=110.36,Pro_isomerase|PF00160.17|8.1e-25 S_Transcript_55784:228-1589(+)
MSSIMYHHCCPSIGSSKLSFPKSPTTFLNPGSANCPKNVRFRKWGPHCCSNDSRQIVFNDPQKKKPFSLKECAISIALAVGLITGSPALNWQTDAVAVTTPPALPDLAVLISGPPIKDPGALLRYALPINNKAIREVQKPLEDITDSLKVAGLKALDSVERNIKQASRALKNGKNDIISGLAESKKDRGIELLDKLEAGLGELQQIVEDRNRDGVAPKQKELLQYVGSVEEDMVDGFPYEVPEEYQSMPLLKGRATVDMKVKVKDNPNLEDCVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKPRTIPLEIMAEGEKTPFYGSTLEELGLYKAQTRLPFNAFGTMAMAREEFENNSASSQIFWLLKESELTPSNANILDGRYAVFGYVTDNEDFLADLKVGDVIESMQVVSGLDNLVNPSYKIAG*

Click here to download the sequence:
Link to NCBI Protein BLAST