Transcript Information: S_Transcript_55785.p1


Annotated TAIR IDAT3G01480.1
Annotated Gene Namecyclophilin 38
Annotated Gene Symbol(s)CYP38, ATCYP38
Annotation TypeOrtholog
Chromosome Positionchr3:188569-190674 | Forward length=437
E-Value2.3E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1196195674037
Replicate 23.807295543111
Replicate 36.0387719919754
Condition 2: 8 Hour
Replicate 12.0759229512253
Replicate 20.89091432636079
Replicate 33.8670343000187
Condition 3: 24 Hour
Replicate 13.2863984012398
Replicate 26.6186352391103
Replicate 34.6872825885614


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55785.p1 GENE.S_Transcript_55785~~S_Transcript_55785.p1 ORF type:5prime_partial len:226 (+),score=49.66 S_Transcript_55785:3-680(+)
AGCTCAAAACTTTCCTTCCCCAAATCCCCAACTACATTTCTTAATCCGGGTTCGGCTAATTGTCCCAAAAATGTTCGTTTTCGGAAGTGGGGTCCTCATTGTTGCTCCAATGACTCGCGTCAGATTGTTTTCAATGACCCACAAAAAAAGAAGCCCTTTTCGTTGAAAGAATGTGCCATTTCGATTGCATTAGCAGTTGGGTTAATAACTGGATCGCCTGCTTTGAATTGGCAAACTGATGCCGTAGCAGTTACTACTCCCCCAGCACTGCCAGATTTGGCTGTTCTAATCTCTGGTCCACCAATCAAGGATCCAGGAGCCCTTTTGAGATATGCATTGCCCATTAACAATAAGGCTATTAGAGAAGTTCAGAAACCGTTGGAAGATATCACGGATAGTCTCAAGGTTGCAGGGCTTAAAGCTCTTGATTCTGTTGAGAGGAACATAAAGCAGGCTTCTCGTGCACTTAAGAATGGCAAGAATGACATAATTTCAGGATTGGCTGAATCAAAGAAAGACCGTGGGATTGAGTTGCTCGACAAGTTGGAAGCTGGACTGGGTGAACTTCAACAGATTGTGGAGGACAGGAATCGGGATGGGGTTGCACCTAAACAGAAGGAGTTGCTTCAATATGTTGGCAGGTTAGTATCTTGGTGGATTTCAAGTCTTAGTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55785.p1 GENE.S_Transcript_55785~~S_Transcript_55785.p1 ORF type:5prime_partial len:226 (+),score=49.66 S_Transcript_55785:3-680(+)
SSKLSFPKSPTTFLNPGSANCPKNVRFRKWGPHCCSNDSRQIVFNDPQKKKPFSLKECAISIALAVGLITGSPALNWQTDAVAVTTPPALPDLAVLISGPPIKDPGALLRYALPINNKAIREVQKPLEDITDSLKVAGLKALDSVERNIKQASRALKNGKNDIISGLAESKKDRGIELLDKLEAGLGELQQIVEDRNRDGVAPKQKELLQYVGRLVSWWISSLSL*

Click here to download the sequence:
Link to NCBI Protein BLAST