Transcript Information: S_Transcript_55788.p1


Annotated TAIR IDAT3G01480.1
Annotated Gene Namecyclophilin 38
Annotated Gene Symbol(s)CYP38, ATCYP38
Annotation TypeOrtholog
Chromosome Positionchr3:188569-190674 | Forward length=437
E-Value6.9E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.408964709126
Replicate 212.235266369312
Replicate 313.801245710668
Condition 2: 8 Hour
Replicate 110.401471001007
Replicate 213.552656636984
Replicate 316.568442793182
Condition 3: 24 Hour
Replicate 113.525339889499
Replicate 212.114286811411
Replicate 312.245892383776


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55788.p1 GENE.S_Transcript_55788~~S_Transcript_55788.p1 ORF type:5prime_partial len:449 (+),score=91.40,Pro_isomerase|PF00160.17|3.6e-12 S_Transcript_55788:2-1348(+)
GCTTTCCCGGTTCAGTGGAGAACAAATTTGAGGAAATCTTCCCTTAATGTGATGTGGAACAAAACCTTATCTACATCATCTTCTTGCTCACCCTCCCACAGGATTTCAAACCCCTTGTATCTCCCAATCCCACCCAGGCGTACATTACCCTTATTTGTTATCTCCTTATTCTTTCTTCTTTCATACCATAGTAAAAGAACTATGTCTTCTATTATGTGCCACCATTGCTGTCCTTCAATCAGCAGCTCAAAACTTTCCTTCCCCAAATCCCCAACTACATTTCTTAATCCGGGTTCGGCTAATTGTCCCAAAAATGTTCGTTTTCGGAAGTGGGGTCCTCATTGTTGCTCCAATGACTCGCGTCAGATTGTTTTCAATGACCCACAAAAAAAGAAGCCCTTTTCGTTGAAAGAATGTGCCATTTCGATTGCATTAGCAGTTGGGTTAATAACTGGATCGCCTGCTTTGAATTGGCAAACTGATGCCGTAGCAGTTACTACTCCCCCAGCACTGCCAGATTTGGCTGTTCTAATCTCTGGTCCACCAATCAAGGATCCAGGAGCCCTTTTGAGATATGCATTGCCCATTAACAATAAGGCTATTAGAGAAGTTCAGAAACCGTTGGAAGATATCACGGATAGTCTCAAGGTTGCAGGGCTTAAAGCTCTTGATTCTGTTGAGAGGAACATAAAGCAGGCTTCTCGTGCACTTAAGAATGGCAAGAATGACATAATTTCAGGATTGGCTGAATCAAAGAAAGACCGTGGGATTGAGTTGCTCGACAAGTTGGAAGCTGGACTGGGTGAACTTCAACAGATTGTGGAGGACAGGAATCGGGATGGGGTTGCACCTAAACAGAAGGAGTTGCTTCAATATGTTGGCAGTGTTGAAGAGGACATGGTTGATGGATTTCCATATGAAGTTCCGGAAGAGTACCAAAGTATGCCTCTCTTGAAGGGAAGGGCCACTGTAGATATGAAGGTCAAAGTGAAGGACAACCCAAATCTTGAAGACTGTGTCTTTCGCATTGTGCTGGATGGTTATAATGCCCCAGTAACTGCTGGCAATTTTGTGGATTTGGTGCAAAGACACTTTTATGATGGCATGGAGATCCAAAGAGCTGATGGCTTTGTTGTGCAAACTGGAGATCCAGAAGGTCCTGCCGAGGGTTTTATTGATCCCAGTACAGAAAAACCTCGTACAATTCCATTGGAAATCATGGCGGAAGGAGAAAAAACTCCATTTTATGGGTCAACCTTAGAAGTAAGGACTTTCTTTGCTTGTCTAGCAACCATGCGTCACAAACAACTTAGCAGACTTCTATCATCGATATGCATTCAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55788.p1 GENE.S_Transcript_55788~~S_Transcript_55788.p1 ORF type:5prime_partial len:449 (+),score=91.40,Pro_isomerase|PF00160.17|3.6e-12 S_Transcript_55788:2-1348(+)
AFPVQWRTNLRKSSLNVMWNKTLSTSSSCSPSHRISNPLYLPIPPRRTLPLFVISLFFLLSYHSKRTMSSIMCHHCCPSISSSKLSFPKSPTTFLNPGSANCPKNVRFRKWGPHCCSNDSRQIVFNDPQKKKPFSLKECAISIALAVGLITGSPALNWQTDAVAVTTPPALPDLAVLISGPPIKDPGALLRYALPINNKAIREVQKPLEDITDSLKVAGLKALDSVERNIKQASRALKNGKNDIISGLAESKKDRGIELLDKLEAGLGELQQIVEDRNRDGVAPKQKELLQYVGSVEEDMVDGFPYEVPEEYQSMPLLKGRATVDMKVKVKDNPNLEDCVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKPRTIPLEIMAEGEKTPFYGSTLEVRTFFACLATMRHKQLSRLLSSICIQK*

Click here to download the sequence:
Link to NCBI Protein BLAST