Transcript Information: S_Transcript_558.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18084253735668
Replicate 30.15116996789837
Condition 2: 8 Hour
Replicate 10.17479828128798
Replicate 20.18337580852235
Replicate 30.34944012467183
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.20673806889439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_558.p1 GENE.S_Transcript_558~~S_Transcript_558.p1 ORF type:internal len:122 (+),score=7.57,zf-RVT|PF13966.2|6.8e-13,zf-RVT|PF13966.2|1.6e+04 S_Transcript_558:3-365(+)
TTCATTAAGGTGCGGGGCTTTACCTGGACCCTTACTCTGGACAGGATCAATACGAATGACATGCTGCAACGGCGACGACCGGGGTGGTGCCTCTCTCCTGATATTTGTGTGATGTGTGGGGCTAGTGGTGAGTCAGGTTCTCATTTATTTTTGCATTGCAAGCTGGCGCGGGCTCTTTGGGCCCAACTCTTTGGTGTGAAGGGGGACGTGTTGGTGTTCCCCGCGACGGTCCTTGAGTTTCTGCAGATTCGTCATGTGGGCTTTGGGAGGGATAAGGAGTTGCGGATCCTTTGGAGGAACGCTTTGCTAGCTGTGTTGTGGTGTATCCGGTTGGAGCGTAACGCTAGGGTGTTTTCCAGTACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_558.p1 GENE.S_Transcript_558~~S_Transcript_558.p1 ORF type:internal len:122 (+),score=7.57,zf-RVT|PF13966.2|6.8e-13,zf-RVT|PF13966.2|1.6e+04 S_Transcript_558:3-365(+)
FIKVRGFTWTLTLDRINTNDMLQRRRPGWCLSPDICVMCGASGESGSHLFLHCKLARALWAQLFGVKGDVLVFPATVLEFLQIRHVGFGRDKELRILWRNALLAVLWCIRLERNARVFSST

Click here to download the sequence:
Link to NCBI Protein BLAST