Transcript Information: S_Transcript_5582.p1


Annotated TAIR IDAT1G13460.1
Annotated Gene NameProtein phosphatase 2A regulatory B subunit family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4616504-4618180 | Forward length=492
E-Value5.6E-256
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.528541274859
Replicate 253.611308214614
Replicate 357.098144535216
Condition 2: 8 Hour
Replicate 160.251390684875
Replicate 256.85283608253
Replicate 356.092182469154
Condition 3: 24 Hour
Replicate 151.865875005499
Replicate 246.067133319293
Replicate 348.701298793756


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5582.p1 GENE.S_Transcript_5582~~S_Transcript_5582.p1 ORF type:complete len:521 (+),score=96.13,B56|PF01603.16|3.3e-187 S_Transcript_5582:726-2288(+)
ATGATAAAGCAGATACTGGGTAGGCTTCCAAAGAAGCCATCTAAGTCATCTGATGCCCGAGATGCTCTCTCTTCGAGTGTTTTAGCCAGTTCTAGAAGCAATGATTCAGCTGTCCATAAATCAGGAAATGGGAAAGATGTGCCTCATCATGGACACAATTCGTCTTCGAATTCTGGTTTGATTCATGCAAATAAATATGCCCAGACCGAGGATTTGAAGGTGAATGACAGCTTGAGCATCAATTCCTTCGAGGCGTTGCCAAGTTTTAGGGATGTTCCTAGCTCTGAGAAGCAGAATCTGTTTGTAAAAAAGCTTCAACTATGTTGCATACCTTTTGATTTCACCGATCCCACAAAGAACCTAAAAGAGAAAGAGATCAAGAGACAGACATTACTCGAGCTTGTGGATTATGTCAGCTCTGCTAATGGGAAGTTCTCAGAGAATGTGATGCAAGAAGTCATTAGAATGGTGTCCACAAACTTGTTTAGGTCCCCTACTGCTCAGCCCCGTGAAAACAAGGCTTTAGAAGCCTATGACTTGGAGGAGGAGGAGCCTTTGATGGACCCTGCATGGCCTCACTTACAGATTGTTTATGAGTTTTTCTTAAGGTTTGTGGCATCACCGGAGACGGATACAAAACTGGCCAAGAGGTATATTGATCATGGGTTTATTATAAAGTTGTTGGATCTATTCGATTCTGAAGACCCAAGAGAGAGGGAGTACCTGAAAACAATTCTTCATCGCATTTATGGCAAGTTTATGGTACATAGACCGTTTATTCGGAAATCTATTAACAACATCTTTTATCGTTTTATTTTTGAAACGGAGAAATTTAATGGGGTTGCTGAGCTTTTAGAAGTTTTGGGTAGTATCATTAATGGGTTTGCTTTGCCTTTGAAAGAGGAGCACAAGTTGTTCCTGGTCCGTGTTCTCATTCCCCTCCACAAACCAAAGTGCCTACCTATGTATCACCAGCAGTTATCATATTGTATCACACAGTTTGTGGAGAAAGATAGTAAGCTTGCAGATACTGTGATAAGGGGTTTGTTGAAATACTGGCCGATCACAAACAGTTCAAAAGAAGTCATGTTTCTCAGCGAATTAGAGGAGGTGTTGGAAGCAACCCAACTTCCGGAATTCCAGCGTTGTATGGTGCCATTATTTCGTCGTATTGCTTGTTGTTTGAGCAGCTCTCACTTTCAGGTGGCAGAACGTGCTTTGTACCTATGGAGCAATGATCACATCGAAAACTTGATTAAACAGAATCGAAAAGCGATACTGCCCATAATTTTCCCTGCATTGGAAAGAAATTGCCGTACCCACTGGAATCAGGCTGTGCAGAGCCTGACCTTAAATGTGCGGAAGATTTTCTCTGATGCTGATCCTGAACTTTTTGAGGAGACCTTGCGGAAGTTCGAGGAAGATGAAGCTAAATTTCAAGAGCTCAAAGCCAAACAGGAAGCCGCATGGAGGCGTTTAGAAGAGATCGTGGCAACCAAAACCTCAAGCACTCAAGTGTCATTGGCTCCTCAAAGTATACCTGCTCAAACAGTCCTCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5582.p1 GENE.S_Transcript_5582~~S_Transcript_5582.p1 ORF type:complete len:521 (+),score=96.13,B56|PF01603.16|3.3e-187 S_Transcript_5582:726-2288(+)
MIKQILGRLPKKPSKSSDARDALSSSVLASSRSNDSAVHKSGNGKDVPHHGHNSSSNSGLIHANKYAQTEDLKVNDSLSINSFEALPSFRDVPSSEKQNLFVKKLQLCCIPFDFTDPTKNLKEKEIKRQTLLELVDYVSSANGKFSENVMQEVIRMVSTNLFRSPTAQPRENKALEAYDLEEEEPLMDPAWPHLQIVYEFFLRFVASPETDTKLAKRYIDHGFIIKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKSINNIFYRFIFETEKFNGVAELLEVLGSIINGFALPLKEEHKLFLVRVLIPLHKPKCLPMYHQQLSYCITQFVEKDSKLADTVIRGLLKYWPITNSSKEVMFLSELEEVLEATQLPEFQRCMVPLFRRIACCLSSSHFQVAERALYLWSNDHIENLIKQNRKAILPIIFPALERNCRTHWNQAVQSLTLNVRKIFSDADPELFEETLRKFEEDEAKFQELKAKQEAAWRRLEEIVATKTSSTQVSLAPQSIPAQTVLS*

Click here to download the sequence:
Link to NCBI Protein BLAST