Transcript Information: S_Transcript_55823.p1


Annotated TAIR IDAT3G12730.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4047234-4048356 | Reverse length=235
E-Value7.9E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.565470660893
Replicate 21.5337768141588
Replicate 30.59174554278932
Condition 2: 8 Hour
Replicate 11.5965532857747
Replicate 21.9141688675702
Replicate 30.68393093919726
Condition 3: 24 Hour
Replicate 10.93454047018585
Replicate 20.36359056004835
Replicate 31.4836496708892


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55823.p1 GENE.S_Transcript_55823~~S_Transcript_55823.p1 ORF type:3prime_partial len:187 (+),score=35.01,Myb_DNA-binding|PF00249.27|4.7e-08,Myb_CC_LHEQLE|PF14379.2|1.6e+04,Myb_CC_LHEQLE|PF14379.2|2e-06 S_Transcript_55823:185-742(+)
ATGTATCCAAGATTCATACAACCCCAACAACAGCAACAACAACAACAACAACAGCAACAGCTTCTAAATGAATCTATAATGGGATTGGGGGCCCCACTTGACGAGATTCATCATCATCACCACCACCTGGGTCCCACCACAACCACCACTTCTCCGGTACCCGGTGGTGGTGACCCGAGACTGGTATTGACTTCGGATCCAAAGCCCCGGCTCCGGTGGACTGCTGACCTTCATGAACGCTTTGTTGATGCTGTCACTCAGCTTGGCGGGCCCCACAAAGCCACGCCTAAGGCTATAATGCGGACGATGGGAGTGAAAGGACTGACCCTTTTCCATTTGAAAAGTCATCTTCAGAAATACAGACTAGGTAAGCAATCTGGGAAGGATATGGGTGAGGCTCCAAAAGATGGCATTTCAGCTTCATACCAGTTGGAAAGCCCTCGCACAAGTAATTCCTCCTCTAGTTTGCCGACTTCAGATATGGATGAGGGGTCTAAAGTTCGGGAGGCACTAAGAACTCAGATGGAGGTTCAAACAAAACTACATTTGCAGGTCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55823.p1 GENE.S_Transcript_55823~~S_Transcript_55823.p1 ORF type:3prime_partial len:187 (+),score=35.01,Myb_DNA-binding|PF00249.27|4.7e-08,Myb_CC_LHEQLE|PF14379.2|1.6e+04,Myb_CC_LHEQLE|PF14379.2|2e-06 S_Transcript_55823:185-742(+)
MYPRFIQPQQQQQQQQQQQQLLNESIMGLGAPLDEIHHHHHHLGPTTTTTSPVPGGGDPRLVLTSDPKPRLRWTADLHERFVDAVTQLGGPHKATPKAIMRTMGVKGLTLFHLKSHLQKYRLGKQSGKDMGEAPKDGISASYQLESPRTSNSSSSLPTSDMDEGSKVREALRTQMEVQTKLHLQVE

Click here to download the sequence:
Link to NCBI Protein BLAST