Transcript Information: S_Transcript_55831.p1


Annotated TAIR IDAT3G12730.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:4047234-4048356 | Reverse length=235
E-Value4.8E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5383237708197
Replicate 21.2753057547696
Replicate 30.74623787621505
Condition 2: 8 Hour
Replicate 11.4792178254659
Replicate 21.2931704416027
Replicate 30.86249094355416
Condition 3: 24 Hour
Replicate 11.1364390255222
Replicate 20.26200938238552
Replicate 30.43737649257427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55831.p1 GENE.S_Transcript_55831~~S_Transcript_55831.p1 ORF type:3prime_partial len:173 (+),score=28.90,Myb_DNA-binding|PF00249.27|4e-08,Myb_CC_LHEQLE|PF14379.2|1.6e+04,Myb_CC_LHEQLE|PF14379.2|1.8e-06 S_Transcript_55831:185-700(+)
ATGTATCCAAGATTCATACAACCCCAACAACAGCAACAACAACAACAACAACAGCAACAGCTTCTAAATGAATCTATAATGGGATTGGGGGCCCCACTTGACGAGATTCATCATCATCACCACCACCTGGGTCCCACCACAACCACCACTTCTCCGGTACCCGGTGGTGGTGACCCGAGACTGGTATTGACTTCGGATCCAAAGCCCCGGCTCCGGTGGACTGCTGACCTTCATGAACGCTTTGTTGATGCTGTCACTCAGCTTGGCGGGCCCCACAAAGCCACGCCTAAGGCTATAATGCGGACGATGGGAGTGAAAGGACTGACCCTTTTCCATTTGAAAAGTCATCTTCAGAAATACAGACTAGGCATTTCAGCTTCATACCAGTTGGAAAGCCCTCGCACAAGTAATTCCTCCTCTAGTTTGCCGACTTCAGATATGGATGAGGGGTCTAAAGTTCGGGAGGCACTAAGAACTCAGATGGAGGTTCAAACAAAACTACATTTGCAGGTCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55831.p1 GENE.S_Transcript_55831~~S_Transcript_55831.p1 ORF type:3prime_partial len:173 (+),score=28.90,Myb_DNA-binding|PF00249.27|4e-08,Myb_CC_LHEQLE|PF14379.2|1.6e+04,Myb_CC_LHEQLE|PF14379.2|1.8e-06 S_Transcript_55831:185-700(+)
MYPRFIQPQQQQQQQQQQQQLLNESIMGLGAPLDEIHHHHHHLGPTTTTTSPVPGGGDPRLVLTSDPKPRLRWTADLHERFVDAVTQLGGPHKATPKAIMRTMGVKGLTLFHLKSHLQKYRLGISASYQLESPRTSNSSSSLPTSDMDEGSKVREALRTQMEVQTKLHLQVE

Click here to download the sequence:
Link to NCBI Protein BLAST