Transcript Information: S_Transcript_55918.p1


Annotated TAIR IDAT3G56590.2
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20965105-20967784 | Forward length=489
E-Value6.1E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.227768812221
Replicate 245.269575610604
Replicate 342.998897646765
Condition 2: 8 Hour
Replicate 128.354870829077
Replicate 227.467658607664
Replicate 329.723765271391
Condition 3: 24 Hour
Replicate 151.942278522079
Replicate 244.530192745379
Replicate 342.410400592306


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55918.p1 GENE.S_Transcript_55918~~S_Transcript_55918.p1 ORF type:complete len:540 (+),score=98.39 S_Transcript_55918:335-1954(+)
ATGGGCAAGCCAGAAGATGATGAATTTTCTCTCTCATCAACTGGTGAAAGAAGAAGAACTAATGGTAATAATGGTGATGGTGATGAGAGAGGAAGGTGTTTTTGTTGTAACTGTTTTAGGGGAAGTAGGTTTATTGGGTTGAGATGTTTAGTGACACTGATACTAGGGATTTCTGTCCTTGTTTTTGCTCTTTTTTGGCTGCCCCCTTTCTTCAAGTCCCAAGATCCAGGTGACTTAGATCTGGATCCACGTTACAGAGGGCACACAATTGTCGCAACTTTTAAATTGCAGAAGCCAGTTTCTTTTCTGAAAGACAACGTTGCACAGCTTGAAGCTGATATCTACGATGAATTTCAAGCTCCCGGTACAAAAGTGACTGTCTTATCTCTGGAAAGCTCACCTGGATCCGATGAAACTCTGGTTGTGTTCGGGATGGATTCTGAATTTAAGCATTTCAAACTATCTCCAACTGAACTGAGCTTGATACGATCAACTTTTGGATATCTAGTCACGCGGCGTACAGACTTCAAGTTGACAACATCTTTATTTGGGCAGCCATCCTTTTTTGAAGTTTTAAAGTTTACTGGTGGAATCACCGTCAGTCCTTCCGATAAAGCATATCCTCTGCAAAATGTTCAGATTCTTTTCAACTTCACTTTGAACAACTCCATTCTCCAAATTCAAGAAAATTTTGAGGACCTGACAAAGCAACTGCAGTCTGGGCTTCATTTGACTACTAATGAGGTCTTGCACATTCGCTTAACAAATTCAAGAGGTTCCACTGTGGCTCCCCCAGCTACTGTTCAGACGTCTGTTGTGCTGGCAGTTGGGGTTCCTTCTGCTCCAAGGCTGAAGCAGCTCACACAGACCATCAAAGATTCTCCTGCTAGGAATCTCGGTCTTAACAACAGGGTGTTTGGTAAAGTTAAGCAGGTAAGCCTTTCAGCACTCCCAAGCCCACTTGACGCTAATAGCCCAGCCCCTGCTCCATCTCCTTTGCCTCATTCTCACCACCACCGTCACCACCACCGTCACCAGCATGATCACCGCCACCATCAAGACCATGGTGCTTATTTGCCCCCTGCTGGCGCACCCTCATATTCACCTGTGGGAGCCCCATTCCGATCTACCAAGTGTCCACCGGCACCTCAGAAAAGTGCCCCCCCACATGTGAAAAGCCATCCAGCAGTTCCCCTTGGTGCCCCTGCTCCCAGTAAAAGCTACTATCAAGCAACCCCTCCTGTTGCCCCGGCGCCTGCCAAAAGCTATCAGGCAAGCTCTCCTGGTTGCAGGTTTAGGTCCAAGAGTAGGCATATAGGCAAAAGCCCAGCACTATCTCCTAAGGCTGCAGCAATGAGTCCCGCCACTTCTCCTCATTATTCTGCTGCCTCACCTCGGCGAGAGCCTAAGCCACTACCACCTATTGTGCATCAGATCTCACCTGCTAGTCGTCTCCCAGATGTTATTTATGCTCGTGTCCCTCCTCCATCAAAGATTGAAGATCCAGATCCCCCAGACAGAGAGCCATCAATCGCACCTTCTCCATCTGGTGCGGGTCATATTCAAGCTACCCATTGGGGATTAGCAGTGGTAGTAGCTTTGTTATTCCAGCCATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55918.p1 GENE.S_Transcript_55918~~S_Transcript_55918.p1 ORF type:complete len:540 (+),score=98.39 S_Transcript_55918:335-1954(+)
MGKPEDDEFSLSSTGERRRTNGNNGDGDERGRCFCCNCFRGSRFIGLRCLVTLILGISVLVFALFWLPPFFKSQDPGDLDLDPRYRGHTIVATFKLQKPVSFLKDNVAQLEADIYDEFQAPGTKVTVLSLESSPGSDETLVVFGMDSEFKHFKLSPTELSLIRSTFGYLVTRRTDFKLTTSLFGQPSFFEVLKFTGGITVSPSDKAYPLQNVQILFNFTLNNSILQIQENFEDLTKQLQSGLHLTTNEVLHIRLTNSRGSTVAPPATVQTSVVLAVGVPSAPRLKQLTQTIKDSPARNLGLNNRVFGKVKQVSLSALPSPLDANSPAPAPSPLPHSHHHRHHHRHQHDHRHHQDHGAYLPPAGAPSYSPVGAPFRSTKCPPAPQKSAPPHVKSHPAVPLGAPAPSKSYYQATPPVAPAPAKSYQASSPGCRFRSKSRHIGKSPALSPKAAAMSPATSPHYSAASPRREPKPLPPIVHQISPASRLPDVIYARVPPPSKIEDPDPPDREPSIAPSPSGAGHIQATHWGLAVVVALLFQPW*

Click here to download the sequence:
Link to NCBI Protein BLAST