Transcript Information: S_Transcript_55970.p1


Annotated TAIR IDAT3G12300.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3921787-3923092 | Reverse length=190
E-Value4.9E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.515503245092
Replicate 214.207974427091
Replicate 310.524912215249
Condition 2: 8 Hour
Replicate 111.723382111513
Replicate 211.127359271068
Replicate 38.7049011161704
Condition 3: 24 Hour
Replicate 111.665854010684
Replicate 28.8994024514453
Replicate 39.6398389611177


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55970.p1 GENE.S_Transcript_55970~~S_Transcript_55970.p1 ORF type:complete len:191 (+),score=27.24,DUF667|PF05018.9|2e-92 S_Transcript_55970:187-759(+)
ATGTTCAAGAATACATTCCAGTCAGGATTCCTGTCCATTCTGTACAGCCTTGGGAGCAAACCTCTGCAGATATGGGATAAAGAAGTTTCCAATGGTCATGTCAAGCGTCCACAAGATGAGGATATCCAATCAAGTGTCCTTGAGATCGTGGGATCAAATGTTCAGTCAACATTTATCACATGCCCTGCGGATCCGTCTGCAACACTTGGTATTAAACTGCCATTCTTGGTTATGATAGTGAAGAATCTAAAGAAGTACTTCACATTCGAGATTCAGATTCTGGATGATAAGAATGTTAGGCGTCGTTTCCGTGCTTCAAATTATCAAGCTGTGACCCGAGTGAAGCCATATATTTGCACAATGCCTCTGAAGATGGATGAAGGGTGGAATCAAATTCAGTTAAATCTTGCTGATATCACCAAGCAAGCATATGGTACGAATTACGCGGAGACACTGCGAGTTCAAGTCCATGCAAACTGTCGACTGAGACGAATTTATTTTGCTGACCGCCTTTATTCGGAGGAAGAACTGCCCCCAGAGTTTAAGCTGTACCTTCCCATGCAAGCAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55970.p1 GENE.S_Transcript_55970~~S_Transcript_55970.p1 ORF type:complete len:191 (+),score=27.24,DUF667|PF05018.9|2e-92 S_Transcript_55970:187-759(+)
MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHVKRPQDEDIQSSVLEIVGSNVQSTFITCPADPSATLGIKLPFLVMIVKNLKKYFTFEIQILDDKNVRRRFRASNYQAVTRVKPYICTMPLKMDEGWNQIQLNLADITKQAYGTNYAETLRVQVHANCRLRRIYFADRLYSEEELPPEFKLYLPMQAS*

Click here to download the sequence:
Link to NCBI Protein BLAST