Transcript Information: S_Transcript_55971.p1


Annotated TAIR IDAT3G12300.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3921787-3923092 | Reverse length=190
E-Value5.7E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3661955151468
Replicate 23.2749453249436
Replicate 36.1956066530846
Condition 2: 8 Hour
Replicate 15.8311614148411
Replicate 21.7478006749786
Replicate 35.4954919606593
Condition 3: 24 Hour
Replicate 13.4132630454053
Replicate 23.3641595308641
Replicate 35.3202749917042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55971.p1 GENE.S_Transcript_55971~~S_Transcript_55971.p1 ORF type:complete len:128 (+),score=22.74,DUF667|PF05018.9|5.4e-51 S_Transcript_55971:200-583(+)
ATGTTCAAGAATACATTCCAGTCAGGATTCCTGTCCATTCTGTACAGCCTTGGGAGCAAACCTCTGCAGATATGGGATAAAGAAGTTTCCAATGGTCATGTCAAGCGTCCACAAGATGAGGATATCCAATCAAATGTCCTTGAGATTGTGGGGTCAAATGTCCAGTCAACATTTATCACATGTCCTGCGGATCCGTCTGCAACACTTGGTATTAAACTGCCATTCTTGGTTATGATAGTGAAGAATCTAAAGAAGTACTTCACATTCGAGATTCAGATTCTGGATGATAAGAATGTTAGGCGTCGTTTCCGTGCTTCAAATTATCAAGTCTGCTGTGACCCGAGTGAAGCCATATATTTGCACAATGCCTCTGAAGATGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55971.p1 GENE.S_Transcript_55971~~S_Transcript_55971.p1 ORF type:complete len:128 (+),score=22.74,DUF667|PF05018.9|5.4e-51 S_Transcript_55971:200-583(+)
MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHVKRPQDEDIQSNVLEIVGSNVQSTFITCPADPSATLGIKLPFLVMIVKNLKKYFTFEIQILDDKNVRRRFRASNYQVCCDPSEAIYLHNASEDG*

Click here to download the sequence:
Link to NCBI Protein BLAST