Transcript Information: S_Transcript_55979.p1


Annotated TAIR IDAT3G12300.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF667 (InterPro:IPR007714); Has 373 Blast hits to 371 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 4; Plants - 71; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3921787-3923092 | Reverse length=190
E-Value7.6E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0910215256213
Replicate 20.47277406194675
Replicate 31.8442736083601
Condition 2: 8 Hour
Replicate 12.7418358979171
Replicate 21.9175870262623
Replicate 31.0657923802491
Condition 3: 24 Hour
Replicate 11.404313938681
Replicate 22.7520342628422
Replicate 30.36031492007309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_55979.p1 GENE.S_Transcript_55979~~S_Transcript_55979.p1 ORF type:complete len:140 (+),score=17.51,DUF667|PF05018.9|4.6e-51 S_Transcript_55979:200-619(+)
ATGTTCAAGAATACATTCCAGTCAGGATTCCTGTCCATTCTGTACAGCCTTGGGAGCAAACCTCTGCAGATATGGGATAAAGAAGTTTCCAATGGTCATGTCAAGCGTCCACAAGATGAGGATATCCAATCAAATGTCCTTGAGATTGTGGGGTCAAATGTCCAGTCAACATTTATCACATGTCCTGCGGATCCGTCTGCAACACTTGGTATTAAACTGCCATTCTTGGTTATGATAGTGAAGAATCTAAAGAAGTACTTCACATTCGAGATTCAGATTCTGGATGATAAGAATGTTAGGCGTCGTTTCCGTGCTTCAAATTATCAAGTCTGTAAGTCTACCAAATTACTTGGATTGTTTTTTGTTTCTTTTCAGGAATTCCTTGAAATAAGTCTGCCAGTTAATTGTGTATTTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_55979.p1 GENE.S_Transcript_55979~~S_Transcript_55979.p1 ORF type:complete len:140 (+),score=17.51,DUF667|PF05018.9|4.6e-51 S_Transcript_55979:200-619(+)
MFKNTFQSGFLSILYSLGSKPLQIWDKEVSNGHVKRPQDEDIQSNVLEIVGSNVQSTFITCPADPSATLGIKLPFLVMIVKNLKKYFTFEIQILDDKNVRRRFRASNYQVCKSTKLLGLFFVSFQEFLEISLPVNCVFC*

Click here to download the sequence:
Link to NCBI Protein BLAST