Transcript Information: S_Transcript_56076.p1


Annotated TAIR IDAT3G03300.1
Annotated Gene Namedicer-like 2
Annotated Gene Symbol(s)DCL2, ATDCL2
Annotation TypeOrtholog
Chromosome Positionchr3:768020-774833 | Reverse length=1388
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1978223981271
Replicate 26.2655181732729
Replicate 35.5393840763555
Condition 2: 8 Hour
Replicate 111.049739609162
Replicate 29.9837360121769
Replicate 311.8033661471
Condition 3: 24 Hour
Replicate 111.132339202324
Replicate 27.323395342108
Replicate 38.0961864958771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56076.p1 GENE.S_Transcript_56076~~S_Transcript_56076.p1 ORF type:complete len:1405 (+),score=261.71,Ribonuclease_3|PF00636.22|4e-24,Ribonuclease_3|PF00636.22|5.9e-19,Ribonucleas_3_3|PF14622.2|2.4e-05,Ribonucleas_3_3|PF14622.2|2.8e-13,Helicase_C|PF00271.27|1.8e-17,Dicer_dimer|PF03368.10|2.2e-17,DEAD|PF00270.25|3.4e-14,PAZ|PF02170.18|1.8e+03,PAZ|PF02170.18|1.6e-13,ResIII|PF04851.11|7.1e-14 S_Transcript_56076:295-4509(+)
ATGGATCCAGTTGACATGGAGTTGTGTGAAACCCAAGAGGAATCTTCTCCCCAACTCCCATTTGCTAGAAGTTACCAACTTGAGGCACTTGAGAAAGCAATCAAGCAGAACACAATTGTGTTCTTAGAGACAGGTTCTGGCAAAACATTGATTGCAATCATGCTTCTTCGATACTATGCTCATTTCTTAAGAAGGCCTGCACAACCTTACATTGCAGTGTTTTTGGTTCCCAAAGTTGTCTTGGTCACTCAGCAAGCTGAAGCTATTGAGAAGCACACTGACTTGAAAGTGGGAAAGTACTGGGGAGATATGGGAGTTGATTTCTGGGATGCTGCCACCTGGAAGGAAGAACAGGAAAAATATGAGGTGTTGGTGATGACACCAAAGATCTTGCTAGATGCGCTGAGCCATACTTACATCAAACTGGACATGATAAAAGTTCTAATATTTGATGAATGCCATAATGCTAGGGGTAAACATCCCTATGCTTGCATTATGAAGGATTTTTATCATCGTCAATTGGATACACAAGATGTTCCAAGGATTTTCGGCATGACCGCTTCTCCTGTTAAAGGAAAGGCAAAAGGTTCTGGGTCAGATGCTTATTGGAAGGATATTCGTGCTCTAGAAAGCCTTATGCACTCAAAGGTCTACACATGCGTCAGTGAAGCTGTGCTGGCTGAATACATTCCATTCCCAAATGCGAAGGTTCAATTTTACGATGAGCAGATACCAAATTCATTGCAGAAGCATCTCATTGACAGTGTGAGCATGCTGATGAAGAAGCAAGTATCTGATCTTGGAGGAATGGATGTTGAAAGATCTACGCAACAATCTCTATGTAGTAAAGTTAGAAAACTTTCGTCGACATTTCAGTTTTGTTTGGGTGAACTTGGTGTTTGGCCAGCAATAAAGGCTGCAGAAATATTGTCTCTTGAAGAAACCGATATTTTCAGCTGGGGGCCATTGGATTTGCATGGTCAGGCCACTATAAGGGCTTTTAATTCTAATGTGTTAAAGGAGTTGTCGGCCTACATGCGATCTGGGTTTAATGGGACAATTTCTGATATGAAGGCCAGCACAAATGACAGGCTTCTCAGCTCAAAAGTTCTATGTCTAGTTGATTCCATTCTCGGATATAGGAATTTAAAGGATTTGAGGTGTATAATATTCGTTGAACGGGTTATAACTGCGATGGTTCTTGAAGTTATTTTGGGGAAGCTGCTATCTGAATCAATTGGCTGGAGGGCAAGATACATAGCTGGGAATCAGTCTGCATTGAGACCACAAAGTAGGAAGGAGCAGAATAAAATTGTTGAGGAGTTTTGCAGAGGCACAGTACACATCCTTGTTGCTACCTCTATTCTTGAAGAGGGCTTAGATGTTCAAAGCTGCAACTTGGTTGTTCGTTTTGATCCCTCTGCCAATGTTTGCAGCTTTATCCAGTCAAGAGGTCGTGCTAGGATGCAGGATTCGGATTTCCTGTTAATGGTGAAAAGGGGTGATGCTTCTGAGATGAGTCGGGTACAAAAATATCTCTCGAGTGGTGATGTAATGCGGAAGCAATCTATTAAACATGCTTCTCTTCCTTGTCAACCTATTATGTATGACGAGCTTGACATGATTTTCTATCGTGTTGAAAGCACTGGAGCTATTGTGACTCTGAGTTATAGTGTGAGTTTGATATATTTCTATTGCTCACGGCTTCCTTCTGACAGGTATTATAAACCATCTCCGCGGTTTAGCTATGACGTGGCTTCAGAAACTTGTACTCTATATTTTCCAAATAGCTGTCGAATTCAGCCAATTACTGTTCAAGGAAATACAAAGATTTTGAAGCAGCTTGCTTGCTTGGAAGCATGCAAGAAGCTTCATGAAATAGGTGCTTTGACTGATAATCTTGTTCCAGATATAGTCATAGAAGAGGGTATTCTACAAGAACTCGGGAATGAAATATATGATGAAGATCAAGCATGTTATGTGCCACCTGAATTAGCCAGTCATGGCCCGAGAAGAAGCTCTGATGTTTACCACATTTACTTCATTGAGCTGAAGAGATTTTGTGGTGACGTACCTGTGCATGATATCATATTAGTTGTGAAGACTGAGATTGATATGGACATTGGAGGCATGCAATTTGACTTAGAAGTTGAGTGGGGTAACATTTCTGTGCAATTGAAATACAGTGGAAAGATAAGTCTGACTAATGAACAGGTGCTTCTTTGTAAACAATTCCAAGTTGCTATCTTGAGAGTTCTAAGAGATCATGACCTTAGTAACCTGGTTGAGGCTGTGGAGAAATTGTATAAAGCAGAGCAGAACGGAAGTATGCATCTTCCACAATATGACTATCTTCTTCTGCCATGCGATGGAGTGCAAAGTTCCCCAGTCATTGATTGGAAATCTATTCGTTCTGTATCCTTTCTTTGTAATGAGTTCCAAGGTTCGCCTATAAGTTACAATGTTCACCAGAGCCTTTCTCATGATGAAGTATACACAAAGAACGGCTATGTACATGTGAGTGTACTGGAGAACTGTTTGGTCTATACTCCTCACAATGGGTCAATCTATTGTGTGTCGGGTTTCTTAGATGGCATGAATGGGAATTCCCTTTTGAGGCTGAATGATGGTGAGGTTATAACATACAAGAGTTACTACAAAAAGCGGCATGGTATAGAGCTGTGCTTTGAAGAACAAGGTCTAATTCGTGCAAGAAAACTTTACAAACTGCATAATTACCTACAAAGGTGCAGGCAAAGGAAAGAGAAGGAGGGGAGTAATGCTTTTGTTGAACTGCCTCCAGAACTCTGTGTTGTAATTATGTCTCCTATATCTGGTGCTACTCTTTACAGCTTCTCGTTTGTTCCATCAATTATGCATCGAGTTGAATCTCTGATTTTGAGTATCAACTTGAGGAGAATTGTAATGGATCACTGCAAGCAAAATGTTATCATTCCGGCCACAAAGATTCTGGAAGCACTTACCACCAAACATTGCCAAGAGCAATTTCATCTTGAATCTCTAGAAACCCTTGGAGACTCATTTCTCAAGTATGCAGTCAGCCAGCAGCTGTTTAAGACATACCAAAACAATCATGAAGGGCTTCTTAGTATCAAAAAAGAGAAAATCGTCTCAAATGGTGCACTGTGCAGGCTAGGGTGCAAGCGCAAGATCCCGGGTTTTATACGTAACAAGGTTTTTGATCCTAAAAAGTGGATCATACCTGGTGATCTGCTTGGAAATTGTGTACTCGAAGAAGAGTTTCTTTCTACAAACAGAAAGATCTATTCTAACGGAATCCAAAAACTAAAAAGCAAGAGAGTGGCTGATGTTGTTGAAGCACTAATCGGTGCTTTCCTCATATCTGGGGGTGAAGCGACGGCCTTGTCATTTATGAATTGGCTTGGCATAGAGGTGGAACTTTCTTGCGTAAAATACCAAAGAGAGTTTTCTGTCCATCCATCTAGGCATGTTAACATCAGACATCTCGAGTCCCTTCTGAATTACTCCTTTGAGGATCCATCATTACTGGTTGAAGCTTTAACTCATGGTTCATATATGTTGCCTGAAATACCAGTTTGCTATCAACGTTTGGAGTTTTTGGGAGACGCTGTTTTGGATCATCTGATAACAGTTCATTTCTACTACAAACATCCTGGGCTGTCTCCAGAACTCTTGACCGATCTAAGGTCTGCCTCTGTGAATAATGATTGTTATGCTCGAACTGCAACCCGGGCTGGACTCCACAAGCATATTCTTCATGCTTCCTATGAGCTCCACAAACAGATCACCATCGCTGTTGCTAGTTTCGAGGAATTGCCCTTGGAGTCAACTTTTGGGTGGGAATCCGAGATAAAATTTCCCGATGTGCTTGCAGACGTAATAGAATCACTGGCTGGAGCTATCTTTGTTGATTCGGGATACAACAAAGAAGTCGTATTCAGAAGTATACTGCCTCTTTTGGAACCCCTTGTTACTCCAGAAACAGTGAAGATCAATCCTGTCAGAGAGCTACATGAGATATGTCAGAAGCACCATTACAAAAAGAGAATGGTCAAAGCACTCGAGAATGGGGTTTTTTGCAGGACGATGGAGGTTGAGGCAAATGGGCAATTATTCAGTCATACATGCACTTCATGTGATGTAGATACAGCCATGAAAATTGCTTCCAAAGCTATACTGAAGTCAATGAAGGAAAACATTCCAGACCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56076.p1 GENE.S_Transcript_56076~~S_Transcript_56076.p1 ORF type:complete len:1405 (+),score=261.71,Ribonuclease_3|PF00636.22|4e-24,Ribonuclease_3|PF00636.22|5.9e-19,Ribonucleas_3_3|PF14622.2|2.4e-05,Ribonucleas_3_3|PF14622.2|2.8e-13,Helicase_C|PF00271.27|1.8e-17,Dicer_dimer|PF03368.10|2.2e-17,DEAD|PF00270.25|3.4e-14,PAZ|PF02170.18|1.8e+03,PAZ|PF02170.18|1.6e-13,ResIII|PF04851.11|7.1e-14 S_Transcript_56076:295-4509(+)
MDPVDMELCETQEESSPQLPFARSYQLEALEKAIKQNTIVFLETGSGKTLIAIMLLRYYAHFLRRPAQPYIAVFLVPKVVLVTQQAEAIEKHTDLKVGKYWGDMGVDFWDAATWKEEQEKYEVLVMTPKILLDALSHTYIKLDMIKVLIFDECHNARGKHPYACIMKDFYHRQLDTQDVPRIFGMTASPVKGKAKGSGSDAYWKDIRALESLMHSKVYTCVSEAVLAEYIPFPNAKVQFYDEQIPNSLQKHLIDSVSMLMKKQVSDLGGMDVERSTQQSLCSKVRKLSSTFQFCLGELGVWPAIKAAEILSLEETDIFSWGPLDLHGQATIRAFNSNVLKELSAYMRSGFNGTISDMKASTNDRLLSSKVLCLVDSILGYRNLKDLRCIIFVERVITAMVLEVILGKLLSESIGWRARYIAGNQSALRPQSRKEQNKIVEEFCRGTVHILVATSILEEGLDVQSCNLVVRFDPSANVCSFIQSRGRARMQDSDFLLMVKRGDASEMSRVQKYLSSGDVMRKQSIKHASLPCQPIMYDELDMIFYRVESTGAIVTLSYSVSLIYFYCSRLPSDRYYKPSPRFSYDVASETCTLYFPNSCRIQPITVQGNTKILKQLACLEACKKLHEIGALTDNLVPDIVIEEGILQELGNEIYDEDQACYVPPELASHGPRRSSDVYHIYFIELKRFCGDVPVHDIILVVKTEIDMDIGGMQFDLEVEWGNISVQLKYSGKISLTNEQVLLCKQFQVAILRVLRDHDLSNLVEAVEKLYKAEQNGSMHLPQYDYLLLPCDGVQSSPVIDWKSIRSVSFLCNEFQGSPISYNVHQSLSHDEVYTKNGYVHVSVLENCLVYTPHNGSIYCVSGFLDGMNGNSLLRLNDGEVITYKSYYKKRHGIELCFEEQGLIRARKLYKLHNYLQRCRQRKEKEGSNAFVELPPELCVVIMSPISGATLYSFSFVPSIMHRVESLILSINLRRIVMDHCKQNVIIPATKILEALTTKHCQEQFHLESLETLGDSFLKYAVSQQLFKTYQNNHEGLLSIKKEKIVSNGALCRLGCKRKIPGFIRNKVFDPKKWIIPGDLLGNCVLEEEFLSTNRKIYSNGIQKLKSKRVADVVEALIGAFLISGGEATALSFMNWLGIEVELSCVKYQREFSVHPSRHVNIRHLESLLNYSFEDPSLLVEALTHGSYMLPEIPVCYQRLEFLGDAVLDHLITVHFYYKHPGLSPELLTDLRSASVNNDCYARTATRAGLHKHILHASYELHKQITIAVASFEELPLESTFGWESEIKFPDVLADVIESLAGAIFVDSGYNKEVVFRSILPLLEPLVTPETVKINPVRELHEICQKHHYKKRMVKALENGVFCRTMEVEANGQLFSHTCTSCDVDTAMKIASKAILKSMKENIPDL*

Click here to download the sequence:
Link to NCBI Protein BLAST