Transcript Information: S_Transcript_56084.p1


Annotated TAIR IDAT2G47890.1
Annotated Gene NameB-box type zinc finger protein with CCT domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19608245-19609476 | Forward length=332
E-Value3.1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7219079678323
Replicate 28.5284732743335
Replicate 38.1106710507711
Condition 2: 8 Hour
Replicate 112.843022179786
Replicate 211.029258713143
Replicate 311.583401779738
Condition 3: 24 Hour
Replicate 19.4844732242076
Replicate 28.5703489154255
Replicate 37.7714982760862


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56084.p1 GENE.S_Transcript_56084~~S_Transcript_56084.p1 ORF type:3prime_partial len:357 (+),score=87.54,zf-B_box|PF00643.20|4.2e-05,zf-B_box|PF00643.20|0.00018,zf-B_box|PF00643.20|14,zf-B_box|PF00643.20|8.8e+02 S_Transcript_56084:313-1380(+)
ATGCCTGATTCTCCAATCAACCAAAACACAAAGACCCAGAAACGCCTCTGTGATTTCTGCAGTGAATCAACAGCTCTTCTTTACTGCAGAGCTGATTCTGCAAAGCTCTGTCTTTCCTGTGACCGTGAAGTTCACTCTACAAACCAGCTTTTCACCAAACACACAAGGTTTCAACTCTGTGATGTTTGTGACAGTTCCCCTGCTTCAATCCTCTGTTTCACTGAACACTCTGTTTTGTGTCAGAACTGTGATTTTGAACTCCACAGACTTCCGGGCAGCTGCCCTGCCCATGATAGAAGGCCCCTTGAAGGGTTTTGTGGCTGCCCTTCGGTTCCGGAGTTGTCGGTGCTCGTTGGGTTTCAAGGGTTTGACAGTAAGTGGTTGGAAGTTGGTGAAGAAAAACAAGGATTTGGTGGTGAGGATTTCTTGAATGGTTTGGGTGAGGATGAAAATGATGTGTTTTCTGAGTTTTTTGTATGGGATACTCCTGCTGTTGTTAGTATTGATGAGTTGATTGCTTCTACTGATAAGAATCACAATTTTCAAGCAGCTGTTGTGCCTCCTTTGCCTAAGGATAGGAACTTATCTTGTGGGCAACACAAACAAGAGATAATTCATCAGCTCCGGAAACTGGCAAAGTCAGAGCCGAGTATAAAACAGGAATCAGATCCTCCCCTTGTCAAGCACCATTCCGAGGCTGGTGAAGAAGAAAATGAACTTGGCGTGGAGCATATGTTTCAACCTTACCAGCTTGATCTGGAGCATCCCCCACTTCGAGGACAAGAGGCGAGGCTATATAATTGGAGCAATGATACTGGTGAGGCTACGAATGACAGTTTTGTTTCACCTGCCTTATCAGGAAGCCACATTGAAGAAAGTGCTTTAAATTCTGATCGACATTCAAGCATAAGTAGCGGCGTAAATATTGCTGCAGATAATGGATGGAACTCACAGTCACAGAAACCTGTGGGGACTGAACCATCAGCATTTCTTCCAAAAGTTGTTGCAGTTCACGAGTTTAATAGTGCAGGGCGGGACTCTGCACTATCACGGTACAAAGAGAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56084.p1 GENE.S_Transcript_56084~~S_Transcript_56084.p1 ORF type:3prime_partial len:357 (+),score=87.54,zf-B_box|PF00643.20|4.2e-05,zf-B_box|PF00643.20|0.00018,zf-B_box|PF00643.20|14,zf-B_box|PF00643.20|8.8e+02 S_Transcript_56084:313-1380(+)
MPDSPINQNTKTQKRLCDFCSESTALLYCRADSAKLCLSCDREVHSTNQLFTKHTRFQLCDVCDSSPASILCFTEHSVLCQNCDFELHRLPGSCPAHDRRPLEGFCGCPSVPELSVLVGFQGFDSKWLEVGEEKQGFGGEDFLNGLGEDENDVFSEFFVWDTPAVVSIDELIASTDKNHNFQAAVVPPLPKDRNLSCGQHKQEIIHQLRKLAKSEPSIKQESDPPLVKHHSEAGEEENELGVEHMFQPYQLDLEHPPLRGQEARLYNWSNDTGEATNDSFVSPALSGSHIEESALNSDRHSSISSGVNIAADNGWNSQSQKPVGTEPSAFLPKVVAVHEFNSAGRDSALSRYKEKK

Click here to download the sequence:
Link to NCBI Protein BLAST