Transcript Information: S_Transcript_56090.p1


Annotated TAIR IDAT1G69070.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25967421-25971389 | Reverse length=901
E-Value6E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.494817434914
Replicate 28.9079807603111
Replicate 38.3988046953486
Condition 2: 8 Hour
Replicate 18.0095362693457
Replicate 24.6214147424787
Replicate 38.7064729654149
Condition 3: 24 Hour
Replicate 16.7688371379306
Replicate 25.7457550475247
Replicate 33.7892273284681


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56090.p1 GENE.S_Transcript_56090~~S_Transcript_56090.p1 ORF type:complete len:213 (+),score=50.42,Nop14|PF04147.8|5.3e-46 S_Transcript_56090:154-792(+)
ATGTATCTATTTATTTTCCACAAGACACCAATCTCCTCCCTCACCCCACCAAATCAGAGGTTTGTATTTGATGGTGTTAATGTGTCAACATGCAGGGCCAGTGTGCTTGTGTCTGTGGTGGAAACACTTAGAGGATTGGTAACCATCAACGCAGAATTAAAAGCCTTCCCTGAAATCTTTTTACCTATTTCGGGATTGTTAATTGAACTGTCAGATCAAAGAAACATGCCTCGTCCATTGCAAGAGAAATTGAGGGATGTAGCTGAGCTCATTCGAAAGAAAGTGGAAGAACACCACAAGCTCCGTCAACCAATTCAAATGCGGAAGCAGAATCCGGCGGCCATTAAGTTACTCAATCCCAAGTTTGAGGAGAATTTTGTGAAGGGTAGGGATTATGATCCTGACCGTACCCGGGCTGAGCTTAGGAAGTTTAAGAAACTCCATCGAAAAGAAGCTAAAGGAGCAGCTCGTGAGCTGAGAAAAGATAACCAATTCCTCCATGAAGTTAAGGAAAAAGAGAAGCGACGACTTGAAGAGGAGAAAGCAGAAATGTATGGCAAGACAAAAGCTTTTCTTCAAGAGCAAGAGCATGCTTACAAGTCTGGGCAGCTTGGGAAAGGCCGGAAGAGGAGACGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56090.p1 GENE.S_Transcript_56090~~S_Transcript_56090.p1 ORF type:complete len:213 (+),score=50.42,Nop14|PF04147.8|5.3e-46 S_Transcript_56090:154-792(+)
MYLFIFHKTPISSLTPPNQRFVFDGVNVSTCRASVLVSVVETLRGLVTINAELKAFPEIFLPISGLLIELSDQRNMPRPLQEKLRDVAELIRKKVEEHHKLRQPIQMRKQNPAAIKLLNPKFEENFVKGRDYDPDRTRAELRKFKKLHRKEAKGAARELRKDNQFLHEVKEKEKRRLEEEKAEMYGKTKAFLQEQEHAYKSGQLGKGRKRRR*

Click here to download the sequence:
Link to NCBI Protein BLAST