Transcript Information: S_Transcript_56115.p1


Annotated TAIR IDAT5G09320.1
Annotated Gene NameVacuolar sorting protein 9 (VPS9) domain
Annotated Gene Symbol(s)VPS9B
Annotation TypeHomolog
Chromosome Positionchr5:2889007-2892016 | Reverse length=712
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45363070287239
Replicate 21.1282108296456
Replicate 31.2574592784273
Condition 2: 8 Hour
Replicate 10.84816893306779
Replicate 21.1440149872587
Replicate 31.0900149343456
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 21.0301732534703
Replicate 31.4330707048361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56115.p1 GENE.S_Transcript_56115~~S_Transcript_56115.p1 ORF type:internal len:176 (-),score=23.41 S_Transcript_56115:3-527(-)
CCCTCCCTCTCTTGTCTCTCTCAACTCTCAAGTCTCAACTTCCCTAGACCTTCCTTACTCCCTTTCCATATCCCACAACAACTCTCCAAACTCCATCAAAAAATGACCACCCTCAACCTCAAACTCCAATTCTCTAAACTGGGTATCCCTCAAAACCCCAGAATTCACACTTTCAACCGCAATCATAATCCCTATCCAATGAAACTCCACTTGGGTTCCTCTCCTTACAGAAAAATTTCAAGTGGGTTAAGGAGCGTAGGACCCAAAAAGCCCTTGTGGAGATCAAGGGTTTTGTCCACTGAAGCCATTCAAGCAGTTCAGGCCCTTAAACTTGCCAAAACTCCCTCCAAATTAGAGCAGGTCTTGAATACCAAGCTTTCTAGGCTCTTGAAGGCTGACTTGTTGGACACTTTGACGGAGCTTCAGAGACAAAATGAACTTCATTTGGCTCTAAAGGTCTTTTCTTTTTCCTTTCTTTCTTATACTTGTTCTTCTTTTCTGCAAGTTTTCTGCTTTTTAATGTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56115.p1 GENE.S_Transcript_56115~~S_Transcript_56115.p1 ORF type:internal len:176 (-),score=23.41 S_Transcript_56115:3-527(-)
PSLSCLSQLSSLNFPRPSLLPFHIPQQLSKLHQKMTTLNLKLQFSKLGIPQNPRIHTFNRNHNPYPMKLHLGSSPYRKISSGLRSVGPKKPLWRSRVLSTEAIQAVQALKLAKTPSKLEQVLNTKLSRLLKADLLDTLTELQRQNELHLALKVFSFSFLSYTCSSFLQVFCFLML

Click here to download the sequence:
Link to NCBI Protein BLAST