Transcript Information: S_Transcript_56131.p1


Annotated TAIR IDAT1G06570.1
Annotated Gene Namephytoene desaturation 1
Annotated Gene Symbol(s)PDS1, HPD
Annotation TypeOrtholog
Chromosome Positionchr1:2012015-2013543 | Reverse length=473
E-Value8.7E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 180.91066818481
Replicate 287.264008809141
Replicate 389.243038364269
Condition 2: 8 Hour
Replicate 138.309370077534
Replicate 236.285436831771
Replicate 338.339913812987
Condition 3: 24 Hour
Replicate 197.98432080233
Replicate 289.134185125769
Replicate 392.31155401962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56131.p1 GENE.S_Transcript_56131~~S_Transcript_56131.p1 ORF type:complete len:447 (+),score=17.77,Glyoxalase|PF00903.21|2.4,Glyoxalase|PF00903.21|5.6e-06,Glyoxalase_4|PF13669.2|0.016,Glyoxalase_4|PF13669.2|0.0081 S_Transcript_56131:305-1645(+)
ATGGGCGCAGTCGACCAAACCCAAACCCAAATTCAGACCGGCACCGATTTCAACCTGGTCGGTTTTTCCAACTTCGTCCGAGTTAATCCCCGGTCAGACCGCTTCCCGGTCAAACGCTTCCACCACGTGGAATTCTGGTGCGGCGACTCCACCAACGTGTCCCGCCGGTTTTCCTGGGGACTCGGCATGCCGATTGTCGCCAAATCCGACCTCTCCACCGGCAACCCGGTGCACGCCTCTTACCTCCTTCGGTCCGGCGACCTCAACTTCCTCTTCACCTCCCCTTACTCCCAGTCTCACTCTCTCTCCTCCACGTCAGCAGCCACCATTCCAACCTTCAGCTTCTCTCTCCACTCCTCCTTCCTCTCCTCCCACGGCCTCGGGGTCCGCGCCGTGGCCCTCGAAGTCGACGACGCTGAAGCCGCCTTCCATGTCAGCGTCTCCCACGGGGCCCACCCCGTCTCCCCTCCAATCCACCTCTCCCAAGACGCCGCCGTTGTATCCGAAGTCCACCTCTACGGCGATGTCGTTTTGCGCTACATCAGCTACACCAACTCAAACCCTAGAAACCCTAAAAACCCTAGCGAGTGGTTTCTCCCTGGGTTTGACCCAATGCCTGAGGAATCCTCGTTCCAAGGCCTCGACTACGGAATCCGAAGACTCGATCACGCCGTGGGGAACGTCCCCGAGCTGGGCCCCGCAATCGAGTACTTGAAGCGGTTCACCGGGTTCCACGAGTTCGCCGAGTTCACTGCGGAAGACGTGGGGACGAGTGAGAGCGGGTTGAACTCGGCCGTGCTGGCCAACAACGATGAGACCGTCTTAATGCCGATGAACGAGCCGGTTTACGGGACCAAGAGGAAGAGCCAAATACAGACTTACTTGGAGCACAATGAAGGGGCTGGGGTCCAGCATTTGGCATTGACTAGTGAGGATATATTCTGGACCTTGAGGGAGATGAGGAAGCGGTCCGGGATTGGCGGGTTCGAGTTTATGCCGTCCCCGCCACCGACTTATTACCGGAATCTGAGGAACCGGGCGGCCGATGTTTTGACCGAGGAGCAGATGAAGGAGTGTGAGGAGCTTGGGATTTTGGTTGACAGGGATGATCAGGGTACCTTGCTTCAGATCTTCACTAAGCCTATTGGGGACAGGCCAACCATGTTCATCGAGATAATACAAAGAGTCGGTTGCATGATGAAGGAAGAGGAAGGGAAGGAGTACCAAAAGGGCGGTTGTGGAGGATTTGGAAAGGGAAACTTTTCAGAGCTTTTCAAGTCAATTGAGGAGTATGAGAAGACGCTTGAGCGCAATTCAGTCACAGATGCTGCTGCTGCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56131.p1 GENE.S_Transcript_56131~~S_Transcript_56131.p1 ORF type:complete len:447 (+),score=17.77,Glyoxalase|PF00903.21|2.4,Glyoxalase|PF00903.21|5.6e-06,Glyoxalase_4|PF13669.2|0.016,Glyoxalase_4|PF13669.2|0.0081 S_Transcript_56131:305-1645(+)
MGAVDQTQTQIQTGTDFNLVGFSNFVRVNPRSDRFPVKRFHHVEFWCGDSTNVSRRFSWGLGMPIVAKSDLSTGNPVHASYLLRSGDLNFLFTSPYSQSHSLSSTSAATIPTFSFSLHSSFLSSHGLGVRAVALEVDDAEAAFHVSVSHGAHPVSPPIHLSQDAAVVSEVHLYGDVVLRYISYTNSNPRNPKNPSEWFLPGFDPMPEESSFQGLDYGIRRLDHAVGNVPELGPAIEYLKRFTGFHEFAEFTAEDVGTSESGLNSAVLANNDETVLMPMNEPVYGTKRKSQIQTYLEHNEGAGVQHLALTSEDIFWTLREMRKRSGIGGFEFMPSPPPTYYRNLRNRAADVLTEEQMKECEELGILVDRDDQGTLLQIFTKPIGDRPTMFIEIIQRVGCMMKEEEGKEYQKGGCGGFGKGNFSELFKSIEEYEKTLERNSVTDAAAA*

Click here to download the sequence:
Link to NCBI Protein BLAST