Transcript Information: S_Transcript_56134.p1


Annotated TAIR IDAT5G17920.1
Annotated Gene NameCobalamin-independent synthase family protein
Annotated Gene Symbol(s)ATCIMS, ATMETS, ATMS1
Annotation TypeOrtholog
Chromosome Positionchr5:5935771-5939195 | Forward length=765
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.017531906264
Replicate 227.733132668091
Replicate 326.629932008563
Condition 2: 8 Hour
Replicate 141.380225837334
Replicate 237.791697585333
Replicate 341.610725873743
Condition 3: 24 Hour
Replicate 127.688900218802
Replicate 229.785967317045
Replicate 330.64360535201


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56134.p1 GENE.S_Transcript_56134~~S_Transcript_56134.p1 ORF type:complete len:856 (+),score=204.48,Meth_synt_2|PF01717.14|0.058,Meth_synt_2|PF01717.14|1.7e-156,Meth_synt_1|PF08267.8|8.3e-118,Meth_synt_1|PF08267.8|1.3e+02,Meth_synt_1|PF08267.8|0.00023 S_Transcript_56134:101-2668(+)
ATGATTTCCAGATCTATACTCCAAAAAACACAAAAGCAACTCCTGTTGCCACTTACCAGGAGTTGTTGGGGGACTGGACCTGTGTCTCTCAGTTGTACTCCTATAAATGGAGTAATGAACCAACACTCTCCCTTTCATCCCTCTCTCACTCCTCTCTCTTTTTCTTCTCCTCCTCCTCTTTCCTTTGTCTCTCTTCGTTCTCTCTCTTTCTCTGTCACCAAACCCCGCTTCTCTTTCTCATTTCTTCGCCTCACCGTTCGCGCCAGAACAATGGCATCACACATAGTTGGGTACCCCCGTATGGGACCGAAGAGAGAGTTGAAATTTGCATTGGAATCCTTTTGGGATGGTAAAATCAATGCTGAAGAGTTGCAAAAGGTTGCTTCTACTCTTAGGACTTCCATTTGGAAGGAGATGGCTGATGCTGGGATTAAGTATATTCCTAGCAACACTTTCTCCTACTATGACCAAGTGTTGGATACTACTGCCATGCTTGGTGCTGTTCCCCCGAGATATGGCTGGATTGGTGGTGAGATTGGGTTCGATGTTTACTTCTCCATGGCTCGAGGCAATGCCACTGTCCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCATTACATTGTCCCTGAATTGGGCCCTGACATGAAGTTTACATATGCCTCTCACAAGGCAGTGGCTGAATACAAGGAGGCCAAGGCTCTTGGAGTTGAAACTGTTCCAGTTGTTGTTGGTCCAGTGTCTTACCTATTGTTATCAAAGCCTTCTAAGGGCATTGAGAAGTCCTTCCCTCTTCTTTCTCTGCTTGACAAAATTCTCCCTGTTTACAAGGAGGTCATATCTGAACTTAAGGCTGCTGGTGCATCATGGATTCAGTTTGACGAGCCTAAACTTGTCATGGACCTTGATGCTCACCAATTGCAAGCTTTTGCACATGCCTACTCGGAGCTAGAGCCTTCTCTATCAGGATTGAACGTTCTCATCGAGACCTACTTTGCTGATGTTCCAGCTGAGGCATATAAAACTCTTACTTCATTGAAAGGTGTAACTGCTTATGGCTTTGACCTTGTTCGTGGAACAAAGACCCTTGATTTGATTAAGGGTGGATTTCCTTCTGGCAAGTATCTCTTTGCTGGAGTAGTGGATGGGAGGAACATCTGGGCTAATGACCTTGCGACTTCCCTTCGTACCTTGCATGGTCTTGAGGGTCTTGTCGGGAAAGACAAGCTTGTTGTATCTACCTCATGCTCTCTTCTTCATACTGCTGTTGATCTGGTGAACGAGACTAAGTTGGATGCGGAGCTCAAGTCATGGCTGGCCTTTGCAGCTCAGAAAATTGTTGAGGTGAATGCCTTGGCTAAGGCATTGTCTGGGCAGAAAGACGAGGCTTTTTTCTCTGCAAATGCTGCAGCACAGGCTTCAAGAAAGTCTTCCCCTAGAGTCACTAATGAAGCAGTTCAAAAGGCTGCTGCTGCCTTGAGGGGATCTGATCATCGCCGCGCCACTGATGTAAGTGCCAGGTTGGTGGCTCAACAGAAGATGCTAAATCTTCCACTCCTACCAACCACCACAATTGGATCCTTTCCTCAAACCATGGACCTCAGAAGAGTCCGTCGTGAATACAAGGCCAACAAGATCTCTGAGGATGAGTATGTGAAGGCTATTAAAGAGGAGATTAGCAAGGTTGTTCAACTCCAAGAGGAACTTGACATTGATGTTTTGGTCCATGGAGAGCCAGAGAGAAATGACATGGTTGAGTACTTTGGCGAGCAACTATCTGGTTTTGCCTTCACTGTTAATGGGTGGGTCCAATCTTATGGGTCTCGATGTGTCAAGCCACCTATCATCTATGGTGATGTAAGTCGACCCAAGGCCATGACAGTCTTCTGGTCCACGATGGCTCAGAGCATGACAAAACGCCCTATGAAGGGAATGCTTACGGGCCCTGTAACCATTTTGAACTGGTCCTTTGTCCGAAATGACCAACCTAGGTTTGAGACGTGCTACCAGATCGCTTTGGCCATAAAGGATGAGGTTGAGGATCTTGAGAAGGCCGGGATCACTGTCATCCAAATTGATGAGGCTGCCTTGAGAGAGGGTTTGCCTTTGAGGAAGTCTGAGCAGCCTTTCTATCTAGATTGGGCTGTTCACTCTTTCAGGATAACAAACGTTGGGGTTCAAGACACAACCCAGATTCACACACACATGTGCTACTCCAATTTCAATGACATTATCCACTCAATCATCAACATGGATGCTGACGTAATCACAATCGAGAACTCAAGATCAGATGAGAAACTTCTCTCTGTCTTCCGCGAGGGTGTGAAGTACGGTGCTGGAATTGGCCCCGGTGTGTATGATATCCACTCACCAAGGATCCCATCTACTGATGAAATTGTGGACCGTATCACCAAAATGCTTGCAGTCCTTGAATCTCACATCCTTTGGGTTAACCCAGACTGTGGGCTCAAGACCCGAAAGTACTCCGAAGTGAAGCCTGCCCTTAGCAACATGGTTGCTGCTGCTAAGATTGCCCGCACTCAGCTCGCCAGTGCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56134.p1 GENE.S_Transcript_56134~~S_Transcript_56134.p1 ORF type:complete len:856 (+),score=204.48,Meth_synt_2|PF01717.14|0.058,Meth_synt_2|PF01717.14|1.7e-156,Meth_synt_1|PF08267.8|8.3e-118,Meth_synt_1|PF08267.8|1.3e+02,Meth_synt_1|PF08267.8|0.00023 S_Transcript_56134:101-2668(+)
MISRSILQKTQKQLLLPLTRSCWGTGPVSLSCTPINGVMNQHSPFHPSLTPLSFSSPPPLSFVSLRSLSFSVTKPRFSFSFLRLTVRARTMASHIVGYPRMGPKRELKFALESFWDGKINAEELQKVASTLRTSIWKEMADAGIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWIGGEIGFDVYFSMARGNATVPAMEMTKWFDTNYHYIVPELGPDMKFTYASHKAVAEYKEAKALGVETVPVVVGPVSYLLLSKPSKGIEKSFPLLSLLDKILPVYKEVISELKAAGASWIQFDEPKLVMDLDAHQLQAFAHAYSELEPSLSGLNVLIETYFADVPAEAYKTLTSLKGVTAYGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLATSLRTLHGLEGLVGKDKLVVSTSCSLLHTAVDLVNETKLDAELKSWLAFAAQKIVEVNALAKALSGQKDEAFFSANAAAQASRKSSPRVTNEAVQKAAAALRGSDHRRATDVSARLVAQQKMLNLPLLPTTTIGSFPQTMDLRRVRREYKANKISEDEYVKAIKEEISKVVQLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSTMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQPFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTDEIVDRITKMLAVLESHILWVNPDCGLKTRKYSEVKPALSNMVAAAKIARTQLASAK*

Click here to download the sequence:
Link to NCBI Protein BLAST