Transcript Information: S_Transcript_56169.p1


Annotated TAIR IDAT1G12250.1
Annotated Gene NamePentapeptide repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4159287-4161269 | Forward length=280
E-Value1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.740413004117
Replicate 227.032978413878
Replicate 329.792112135047
Condition 2: 8 Hour
Replicate 138.081054137738
Replicate 234.909917657595
Replicate 339.23521399818
Condition 3: 24 Hour
Replicate 140.208988842577
Replicate 242.214462221878
Replicate 335.338578699476


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56169.p1 GENE.S_Transcript_56169~~S_Transcript_56169.p1 ORF type:complete len:182 (+),score=38.96,Pentapeptide|PF00805.18|2.7e-05,Pentapeptide|PF00805.18|5.3e-08,Pentapeptide|PF00805.18|4.1e-08,Pentapeptide_3|PF13576.2|6.2e-05,Pentapeptide_3|PF13576.2|4.5e-06,Pentapeptide_4|PF13599.2|2.4e-06 S_Transcript_56169:158-703(+)
ATGGCAGCAGCTTCGTCACTTTCCATACTACCACTAAAATCAAGCACTATAGCAAGCTTTTCAGCTTACAGGACTCCCAATTCTTCACAGTATTCCTCAAAGCGCAATACCATTATATGCCAATTGGATCCAAGATCCCAAAACGATGGACCCCTATTATCAGAGTTTAAGGGATTAAAGGCATTGGTATCCACAGCAGTGGCAGCAGCTGTAGTTGTGAGCCTCAACAGCTTTAGCTACCCTAATCCTGCTTTGGCTGATTTGAACAAGTATGAAGCCGAAACTCGTGGCGAATTCGGGATTGGCTCTGCTGCTCAATTTGGTTCTGCTGACTTGAAGAAAGCAGTCCATGTGAATGAAAATTTCAGAAGGGCAAATTTCACAGCAGCAGACATGAGAGAATCAGATTTCAGTGGTTCAACCTTCAATGGGGCTTACCTTGAGAAAGCTGTTGCTTACAAAGCCAATTTCACTGGTGCCGATTTGAGCGATACACTGATGGACAGAATGGTAAAGCAAATTGAGGACAGTGTAGTTTTTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56169.p1 GENE.S_Transcript_56169~~S_Transcript_56169.p1 ORF type:complete len:182 (+),score=38.96,Pentapeptide|PF00805.18|2.7e-05,Pentapeptide|PF00805.18|5.3e-08,Pentapeptide|PF00805.18|4.1e-08,Pentapeptide_3|PF13576.2|6.2e-05,Pentapeptide_3|PF13576.2|4.5e-06,Pentapeptide_4|PF13599.2|2.4e-06 S_Transcript_56169:158-703(+)
MAAASSLSILPLKSSTIASFSAYRTPNSSQYSSKRNTIICQLDPRSQNDGPLLSEFKGLKALVSTAVAAAVVVSLNSFSYPNPALADLNKYEAETRGEFGIGSAAQFGSADLKKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVKQIEDSVVFF*

Click here to download the sequence:
Link to NCBI Protein BLAST