Transcript Information: S_Transcript_56169.p2


Annotated TAIR IDAT1G12250.1
Annotated Gene NamePentapeptide repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4159287-4161269 | Forward length=280
E-Value3.1E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.762027129953
Replicate 227.298027757603
Replicate 327.507809751811
Condition 2: 8 Hour
Replicate 124.216968665219
Replicate 228.249198706095
Replicate 326.735130894383
Condition 3: 24 Hour
Replicate 134.248334286101
Replicate 233.995717364521
Replicate 326.932013517327


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56169.p2 GENE.S_Transcript_56169~~S_Transcript_56169.p2 ORF type:complete len:118 (+),score=25.18,Pentapeptide|PF00805.18|2.8e-08 S_Transcript_56169:842-1195(+)
ATGCTAGGGAAACATAAAGACATTATTTTGCAGGTCCTAAATGAAGCAAATCTAACGAATGCTGTCCTTGTAAGATCAGTCCTTACTCGGAGTGACCTTGGTGGTGCTATGATTGAAGGTGCTGATTTTAGTGATGCTGTCATTGACCTTCCTCAGAAACAGGCTCTTTGCAAGTATGCAAATGGAACAAACCCCATAACGGGAGTGAGCACCAGGGCAAGCCTTGGTTGTGGAAACAAGCGAAGAAATGCGTATGGTAGTCCCTCTTCCCCCTTTTTAAGCGCTCCTCCTCAACAGCTCCTCGACAGGGATGGCTTTTGTGACTCAGCTACTGGCCTTTGCGACTCCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56169.p2 GENE.S_Transcript_56169~~S_Transcript_56169.p2 ORF type:complete len:118 (+),score=25.18,Pentapeptide|PF00805.18|2.8e-08 S_Transcript_56169:842-1195(+)
MLGKHKDIILQVLNEANLTNAVLVRSVLTRSDLGGAMIEGADFSDAVIDLPQKQALCKYANGTNPITGVSTRASLGCGNKRRNAYGSPSSPFLSAPPQQLLDRDGFCDSATGLCDSK*

Click here to download the sequence:
Link to NCBI Protein BLAST