Transcript Information: S_Transcript_56170.p1


Annotated TAIR IDAT1G12250.1
Annotated Gene NamePentapeptide repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4159287-4161269 | Forward length=280
E-Value1.5E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33059628863578
Replicate 20.13703595998456
Replicate 30.11455115579876
Condition 2: 8 Hour
Replicate 10.66227920239544
Replicate 20
Replicate 30.13239656897504
Condition 3: 24 Hour
Replicate 10.27136501230552
Replicate 20.56307606400863
Replicate 30.31331732180268


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56170.p1 GENE.S_Transcript_56170~~S_Transcript_56170.p1 ORF type:5prime_partial len:161 (+),score=34.88,Pentapeptide|PF00805.18|2.7e+02,Pentapeptide|PF00805.18|9e-10,Pentapeptide_3|PF13576.2|4.9e-05,Pentapeptide_3|PF13576.2|2.8e-05 S_Transcript_56170:2-484(+)
ATTATATGCCAATTGGATTCAAGATCCCAAAACAATGGACCCCTATTATCAGAGTCTAAGGGATTAAAGGCATTGGTATCCACAGCAGTGGCAGCAGCTGTAGTTGTGAGCCTCAACAGCTTTAGCTACCCTAATCCTGCTTTGGCTGATTTGAACAAGTATGAAGCCGAAACTCGTGGCGAATTCGGGATTGGCTCTGCTGCTCAATTTGGTTCTGCTGACTTGAAGAAAGCAGTCCATGTGAATGAAAATTTCAGAAGGGCAAATTTCACAGCAGCAGACATGAGAGAATCAGATTTCAGTGGTTCAACCTTCAATGGGGCTTACCTTGAGAAAGCTGTTGCTTACCAAGCCAATTTCACTGGTACGGCTTCATTACTACTACTAGTTATTTACATGATTGCAGCCAAGAAACCTACTAATTCAATTTTTAACTCCATGAAATCCCAAAACAAGAAACCCATATACTTGACCATACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56170.p1 GENE.S_Transcript_56170~~S_Transcript_56170.p1 ORF type:5prime_partial len:161 (+),score=34.88,Pentapeptide|PF00805.18|2.7e+02,Pentapeptide|PF00805.18|9e-10,Pentapeptide_3|PF13576.2|4.9e-05,Pentapeptide_3|PF13576.2|2.8e-05 S_Transcript_56170:2-484(+)
IICQLDSRSQNNGPLLSESKGLKALVSTAVAAAVVVSLNSFSYPNPALADLNKYEAETRGEFGIGSAAQFGSADLKKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYQANFTGTASLLLLVIYMIAAKKPTNSIFNSMKSQNKKPIYLTIL*

Click here to download the sequence:
Link to NCBI Protein BLAST