Transcript Information: S_Transcript_56171.p1


Annotated TAIR IDAT1G12250.1
Annotated Gene NamePentapeptide repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4159287-4161269 | Forward length=280
E-Value1.1E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.906648247211
Replicate 248.824873641721
Replicate 352.06577479197
Condition 2: 8 Hour
Replicate 155.815552274085
Replicate 251.043351409051
Replicate 350.173042016057
Condition 3: 24 Hour
Replicate 157.648410944492
Replicate 262.509574167254
Replicate 355.361021654551


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56171.p1 GENE.S_Transcript_56171~~S_Transcript_56171.p1 ORF type:complete len:277 (+),score=64.01,Pentapeptide|PF00805.18|5.1e-05,Pentapeptide|PF00805.18|1.5e-07,Pentapeptide|PF00805.18|8e-08,Pentapeptide|PF00805.18|1.3e-07,Pentapeptide_4|PF13599.2|1.5e-05,Pentapeptide_4|PF13599.2|1.6e-08,Pentapeptide_3|PF13576.2|1.9e-05 S_Transcript_56171:160-990(+)
ATGGCAGCAGCTTCGTCACTTTCCATACTACCACTAAAATCAAGCACTATAGCAAGCTTTTCAGCTTACAGGACTCCCAATTCTTCACAGTATTCCTCAAAGCCCAGTAACATTATATGCCAATTGGATTCAAGATCCCAAAACAATGGACCCCTATTATCAGAGTCTAAGGGATTAAAGGCATTGGTATCCACAGCAGTGGCAGCAGCTGTAGTTGTGAGCCTCAACAGCTTTAGCTACCCTAATCCTGCTTTGGCTGATTTGAACAAGTATGAAGCCGAAACTCGTGGCGAATTCGGGATTGGCTCTGCTGCTCAATTTGGTTCTGCTGACTTGAAGAAAGCAGTCCATGTGAATGAAAATTTCAGAAGGGCAAATTTCACAGCAGCAGACATGAGAGAATCAGATTTCAGTGGTTCAACCTTCAATGGGGCTTACCTTGAGAAAGCTGTTGCTTACAAAGCCAATTTCACTGGTGCCGATTTGAGCGATACACTGATGGACAGAATGGTCCTAAATGAAGCAAATCTAACGAATGCTGTCCTTGTAAGATCAGTCCTTACTCGGAGTGACCTTGGTGGTGCTATGATTGAAGGTGCTGATTTTAGTGATGCTGTCATTGACCTTCCTCAGAAACAGGCTCTTTGCAAGTATGCAAATGGAACAAACCCCATAACGGGAGTGAGCACCAGGGCAAGCCTTGGTTGTGGAAACAAGCGAAGAAATGCGTATGGTAGTCCCTCTTCCCCCTTTTTAAGCGCTCCTCCTCAACAGCTCCTCGACAGGGATGGCTTTTGTGACTCAGCTACTGGCCTTTGCGACTCCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56171.p1 GENE.S_Transcript_56171~~S_Transcript_56171.p1 ORF type:complete len:277 (+),score=64.01,Pentapeptide|PF00805.18|5.1e-05,Pentapeptide|PF00805.18|1.5e-07,Pentapeptide|PF00805.18|8e-08,Pentapeptide|PF00805.18|1.3e-07,Pentapeptide_4|PF13599.2|1.5e-05,Pentapeptide_4|PF13599.2|1.6e-08,Pentapeptide_3|PF13576.2|1.9e-05 S_Transcript_56171:160-990(+)
MAAASSLSILPLKSSTIASFSAYRTPNSSQYSSKPSNIICQLDSRSQNNGPLLSESKGLKALVSTAVAAAVVVSLNSFSYPNPALADLNKYEAETRGEFGIGSAAQFGSADLKKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAMIEGADFSDAVIDLPQKQALCKYANGTNPITGVSTRASLGCGNKRRNAYGSPSSPFLSAPPQQLLDRDGFCDSATGLCDSK*

Click here to download the sequence:
Link to NCBI Protein BLAST