Transcript Information: S_Transcript_56205.p1


Annotated TAIR IDAT3G15780.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5341434-5342351 | Forward length=117
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.5337308421701
Replicate 26.7377381283429
Replicate 36.7365682700577
Condition 2: 8 Hour
Replicate 14.5970901282442
Replicate 24.5547476272497
Replicate 35.7437912708034
Condition 3: 24 Hour
Replicate 17.7176534487728
Replicate 26.7855723282477
Replicate 35.8901780347277


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56205.p1 GENE.S_Transcript_56205~~S_Transcript_56205.p1 ORF type:complete len:167 (+),score=22.12 S_Transcript_56205:138-638(+)
ATGACACTTGCAAATATGCATCAGAAATTCGTAAGCACCAACAAGAAGAAGCCAGAGAACAGACTTTTTGCTTCCAAAGACATGGCTATGGCTTCTCTTTCTCCAACAACACTCATTTACAAGCCCCAATATCAACCCTACCCAATTCCTTTCTCAACTCTTTCCCTTCCTCCTCATTTCCTCTTTATCTTTTCAATCAAACGCCAACGTTCTTCACCAATTTCCCTCCACCGTTCATTTTCCGGGTTACCCACAAACCCGACTCGCTCAATTCGCCGGTGCCGGGTCGCAAGCCCAGACCCACCTCCTGAACAGCCCGACCCACCTCCTGGAAAACAGCCTGTGCCCTTCACTGGTTTTCCGGCAACTTTGTCAAGGTTTTGGGACAGTGTACAGATTTTTCTTGCAGTACTTTTCTGGATGTCTCTATTTTTCTGGGCATCTGCTTGGGATGGGAAGAATACCGGTGGAAGAAACAAAGGGGATCGTTTCAGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56205.p1 GENE.S_Transcript_56205~~S_Transcript_56205.p1 ORF type:complete len:167 (+),score=22.12 S_Transcript_56205:138-638(+)
MTLANMHQKFVSTNKKKPENRLFASKDMAMASLSPTTLIYKPQYQPYPIPFSTLSLPPHFLFIFSIKRQRSSPISLHRSFSGLPTNPTRSIRRCRVASPDPPPEQPDPPPGKQPVPFTGFPATLSRFWDSVQIFLAVLFWMSLFFWASAWDGKNTGGRNKGDRFRR*

Click here to download the sequence:
Link to NCBI Protein BLAST