Transcript Information: S_Transcript_56208.p1


Annotated TAIR IDAT3G15780.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5341434-5342351 | Forward length=117
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.381678587181
Replicate 29.5979367001618
Replicate 311.669979894708
Condition 2: 8 Hour
Replicate 18.1928053195765
Replicate 27.4572828799089
Replicate 39.6342814033814
Condition 3: 24 Hour
Replicate 110.984150455722
Replicate 28.194824524781
Replicate 38.9773378391091


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56208.p1 GENE.S_Transcript_56208~~S_Transcript_56208.p1 ORF type:complete len:177 (+),score=20.06 S_Transcript_56208:107-637(+)
ATGATCAATAGTTCAACACATCTTACAATTGATGACACTTGCAAATATGCATCAGAAATTCGTAAGCACCAACAAGAAGAAGCCAGAGAACAGACTTTTTGCTTCCAAAGACATGGCTATGGCTTCTCTTTCTCCAACAACACTCATTTACAAGCCCCAGTATCAACCCTACCAATTCCTTTCTCAACTCTTTCCCTTCCTCCTCATTTCCTCTTTATCTTTTCAATCAAACGCCACCGTCGTTCACCAATTCCCCTCCACCGTTCATTTTCCGGGTTACCCACAAACCCGACTCGCTCAATTCGCCGGTGCCGGGTCGCAAGCCCAGACCCACCTCCTGAACAGCCCGACCCACCTCCTGGAAAACAGCCTGTGCCCTTCACTGGTTTTCCGGCAACTTTGTCAAGGTTTTGGGACAGTGTACAGATTTTTCTTGCAGTACTTTTCTGGATGTCTCTATTTTTCTGGGCATCTGCTTGGGATGGGAAGAATACCGGTGGAAGAAACAAAGGGGATCGTTTCAGAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56208.p1 GENE.S_Transcript_56208~~S_Transcript_56208.p1 ORF type:complete len:177 (+),score=20.06 S_Transcript_56208:107-637(+)
MINSSTHLTIDDTCKYASEIRKHQQEEAREQTFCFQRHGYGFSFSNNTHLQAPVSTLPIPFSTLSLPPHFLFIFSIKRHRRSPIPLHRSFSGLPTNPTRSIRRCRVASPDPPPEQPDPPPGKQPVPFTGFPATLSRFWDSVQIFLAVLFWMSLFFWASAWDGKNTGGRNKGDRFRR*

Click here to download the sequence:
Link to NCBI Protein BLAST