Transcript Information: S_Transcript_56211.p1


Annotated TAIR IDAT3G62240.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23033592-23036653 | Reverse length=812
E-Value6.8E-283
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.676572581562
Replicate 213.632509629855
Replicate 315.766643786101
Condition 2: 8 Hour
Replicate 116.013382571874
Replicate 215.013755737664
Replicate 315.439168942423
Condition 3: 24 Hour
Replicate 117.460058025735
Replicate 215.785194036247
Replicate 317.262003788749


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56211.p1 GENE.S_Transcript_56211~~S_Transcript_56211.p1 ORF type:complete len:827 (+),score=160.43 S_Transcript_56211:284-2764(+)
ATGGATGATAGCTGCGCTGTATGTGCTGATGCCCTAGAATGGGTTGCTTACGGTCCCTGTGGTCATCGTGACGTCTGTTCCACTTGCGTCGCACGTCTCCGCTTCATCTGCGACGATCGCCGCTGTTGTATTTGCAAGACCGAATCCGACGTCGTTTTCGTCACCAAGGCACTAGGAGATTACACAACAATGGTGAATGACTTCTCGACATTGCCTGCACAACCAAAGGAGGGTAGGGTGGGGTCCTCTTACTGGTATCATGAGGATACTCAGGCCTTTTTCGATGATACTGAGCACTACAAGATGATCAAGGCCATGTGCAGGCTGTCCTGTAGTGTTTGTGACAAAATGGAGGAACCTTCCCAAGATGGGTTTCGGAGGCGTCAGAGGTTTCGGAATATTGGCCAGCTTAAGGGTCATTTGTCTCACCAGCATAGGCTCTTCATGTGTAACCTTTGTTTAGAAGGAAGGAAGGTATTCGTGTGTGAGCAAAAGCTCTATACTAGAGCACAATTGAATCAACATAAAAGGACAGGAGATTCAGAGGTTGATGGAACAGAAAGTGAAAGAGGAGGTTTTACTGGTCATCCTATGTGTGACTTTTGTCATACCTCATTCTATGGAGAGAATGAGCTATACACTCATATGTCGAGGGAGCACTTCACTTGTCATATTTGTCAAAGGCGACATCCTGGACAATATGAATATTATAAGGACTACGATGACTTAGAGTCTCATTTTCGCAATGACCACTTTTTGTGTGAAGATGAAGAATGCCTTAGAAAGAAGTTCATTGTGTTTCAAACAGAAGCTGATATAAAGAGGCATAATGCATTGGAGCATGGAGGCCGTATGTCAAGATCCAAGCGAAATGCTGTTCTCCAGATACCAACTAGCTTTAGATACCGAAGTAATAACGAGTCAGGACATCATCGTGGAAGGAGGCGGACCTTTCGCCGAGAGTCTTCTCCAGACAATGAGCTTAGTATGGCTATACAAGCCAGTCTTGAGGGGATTAATGGTGGAGGTGCATTGCCTGATCCATCACCATCATCGGTTGCTGCACCGTGTGTTCGTGATGATGCAGATGCAAGTGATATCGATCCCCTTGTGCAGCCATTTGAATCACTAAGCACAAGTGATTCTGAACCATCTGCTAGGTACCGTCAGGCTGTGTCTCAGAGCTCAATTGGTGCACCTCTTGCTGAATCTTCCTTCCCTCCCCTATCAGCTGCATCCAGCTCCCAGCAAAAATCTCAACGAGAATTGGAAGGGTTGACTCAGAACACTATGGAAGCACGAATACGTCGTCAAAACAATGCAGCTGTTCTAAATGTTGGCAGGTCTACACCAGCTAAAAACCGTGGACTTGCTCCTGCTACTACGGGGTCCTGGCCTGCTCCGGTTCCATCCCAAGCTGCTGTCCAAATCAAACCCGCAGCAGCCACTGCTTCTGGTTCATCTAGACCTAGTTATGCTAGTTCTAAACAAGTTCGACAAGTAACTGAACCTGGCTTTGCAGCGGGTGGTTCATGGGCTTCTAGAAATCCTGTGAGTGGCTTTAGGTTAAACCACTCAAGCTCAGCTCCTAACCTCATAGAAACTAGGTCATTTGATCCAGTATCTGATTTCCCTCCGGTCTTGGCAGCACAATCCAACAGGCAAAAGAGTAGTGGCGAATCCACAAAAACAAAAAATGATGTCCAAACTGCCAACAAATCTCTTGTAGAGCAGATTCGGGCTGCTCTTGGTAATGATGAAGATAAATACAACGCCTTCAAAGAGATCTCTCAAGAGTATCGTCAGGGTTTAATAGGCACATTTGAATATCTTGAATATGTAAAACAATTTGACTTGACACATCTTGTACTGGATTTGGCCAGACTATGCCCTGATAATCAGAAGCAAAGGGAGCTTATAGATGCTTATAATGCTAGTCAGCGTAGTGAATCACAAGAACCATTTTGGGGCAATGGAAACCTTCATACCAAGGGAAGTAGAAGCTCAAGAAAGGACAAAGGGAAAAAGGTGATCGTATCTGCGAACAACAATCCAAAGGAGGCCTTAGCAGATAGCATCATCAATACTGTAAGGACTTTGCAATCTCAGGTCAAGCCTATTGAGGGAGAGGTGGAGGTTCTGCAGAAAGATGGTTATCGAACTAACAAAGGGAAATCACTGGCAATAGTTGGTGAGAATCCACTTGAACGTGGTGGTGCTAAGCAGCATCCTGCACAACCAACTGGGAGTGTAGCTGGTCAAACTTCAGGAGATGAGGGAGTAGGAAGCAAGCAAAAAAAGAAGACCTCAAAATTTCATAGAGTTCGCTTGGGTGATACCTCGCCAGCAGCTGTGCTAGGTGCCAGAAGTTCTGCTGATCTTAGTCCAACAGAGGTGGACACCACTTCAGCTTGGCCGAATGCAACGCGTGGACGTGGTGTTTGGAGTAGTGGAGGTGGTCAGAGATTATTTGGAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56211.p1 GENE.S_Transcript_56211~~S_Transcript_56211.p1 ORF type:complete len:827 (+),score=160.43 S_Transcript_56211:284-2764(+)
MDDSCAVCADALEWVAYGPCGHRDVCSTCVARLRFICDDRRCCICKTESDVVFVTKALGDYTTMVNDFSTLPAQPKEGRVGSSYWYHEDTQAFFDDTEHYKMIKAMCRLSCSVCDKMEEPSQDGFRRRQRFRNIGQLKGHLSHQHRLFMCNLCLEGRKVFVCEQKLYTRAQLNQHKRTGDSEVDGTESERGGFTGHPMCDFCHTSFYGENELYTHMSREHFTCHICQRRHPGQYEYYKDYDDLESHFRNDHFLCEDEECLRKKFIVFQTEADIKRHNALEHGGRMSRSKRNAVLQIPTSFRYRSNNESGHHRGRRRTFRRESSPDNELSMAIQASLEGINGGGALPDPSPSSVAAPCVRDDADASDIDPLVQPFESLSTSDSEPSARYRQAVSQSSIGAPLAESSFPPLSAASSSQQKSQRELEGLTQNTMEARIRRQNNAAVLNVGRSTPAKNRGLAPATTGSWPAPVPSQAAVQIKPAAATASGSSRPSYASSKQVRQVTEPGFAAGGSWASRNPVSGFRLNHSSSAPNLIETRSFDPVSDFPPVLAAQSNRQKSSGESTKTKNDVQTANKSLVEQIRAALGNDEDKYNAFKEISQEYRQGLIGTFEYLEYVKQFDLTHLVLDLARLCPDNQKQRELIDAYNASQRSESQEPFWGNGNLHTKGSRSSRKDKGKKVIVSANNNPKEALADSIINTVRTLQSQVKPIEGEVEVLQKDGYRTNKGKSLAIVGENPLERGGAKQHPAQPTGSVAGQTSGDEGVGSKQKKKTSKFHRVRLGDTSPAAVLGARSSADLSPTEVDTTSAWPNATRGRGVWSSGGGQRLFGK*

Click here to download the sequence:
Link to NCBI Protein BLAST