Transcript Information: S_Transcript_56400.p1


Annotated TAIR IDAT5G53070.1
Annotated Gene NameRibosomal protein L9/RNase H1
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21518837-21520167 | Forward length=221
E-Value5E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.338083366467
Replicate 28.4856882913519
Replicate 314.841491759584
Condition 2: 8 Hour
Replicate 110.599602287806
Replicate 214.296802681009
Replicate 316.396805849986
Condition 3: 24 Hour
Replicate 19.8237345874861
Replicate 210.326115333602
Replicate 36.2682003847034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56400.p1 GENE.S_Transcript_56400~~S_Transcript_56400.p1 ORF type:complete len:169 (+),score=33.55,Ribosomal_L9_N|PF01281.15|5.4e+03,Ribosomal_L9_N|PF01281.15|6.3e-15 S_Transcript_56400:157-663(+)
ATGGCGTACATACAATACGGAAGAAACTTGCTACGCCAGGTTCTTCAAGAGGCTAGATCAGATAACTTAGTTCATCCATTGTATTTGACCGGCCAAGGGATCCGATACCGGAAGCTCGAAGTCATCCTCACTACGAACATGGAGAATCTTGGGAAGGCTGGTGAGACTGTGAAGGTTGCTCCGGGGTATTTCCGTAATTATCTAATGCCGAAGTTACTCGCTGTTCCGAACATTGACAAGTTTGTCTATCTTGTTAAAGAGCAGAGAAAGATTTACCAACCTAAAGAGGAGGAGGAAGTTAAGGTGGAGAAAGAAAGTAAGGAAGATTTGATGAAAGATTACTTTGCTGCTGCCAAACGTCTTGACAATTCCAAGCTGGTTCTAAGGAGGTTCTTTAAGGTTGACAATGAACTTCGTGAACCTGTGACCAAAGATGAGATTGTTGCTGAGGTATGGTGTTGCTATACTTCTGTTATCTTTTGTTCCACAGATTGCTGTACTTCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56400.p1 GENE.S_Transcript_56400~~S_Transcript_56400.p1 ORF type:complete len:169 (+),score=33.55,Ribosomal_L9_N|PF01281.15|5.4e+03,Ribosomal_L9_N|PF01281.15|6.3e-15 S_Transcript_56400:157-663(+)
MAYIQYGRNLLRQVLQEARSDNLVHPLYLTGQGIRYRKLEVILTTNMENLGKAGETVKVAPGYFRNYLMPKLLAVPNIDKFVYLVKEQRKIYQPKEEEEVKVEKESKEDLMKDYFAAAKRLDNSKLVLRRFFKVDNELREPVTKDEIVAEVWCCYTSVIFCSTDCCTS*

Click here to download the sequence:
Link to NCBI Protein BLAST