Transcript Information: S_Transcript_56403.p1


Annotated TAIR IDAT1G52770.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19656009-19657546 | Forward length=454
E-Value1.3E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.873265713762
Replicate 211.852335785549
Replicate 314.539738447304
Condition 2: 8 Hour
Replicate 139.08001760442
Replicate 237.407812027822
Replicate 336.385656144317
Condition 3: 24 Hour
Replicate 19.6523903795649
Replicate 211.173786172525
Replicate 310.030161844825


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56403.p1 GENE.S_Transcript_56403~~S_Transcript_56403.p1 ORF type:complete len:430 (+),score=104.07,NPH3|PF03000.10|8.4e-76 S_Transcript_56403:449-1738(+)
ATGAAGAGGGTCACCTTGTCTGAGCCCCCTGTTGCAGGTGCAGGCAAACCACCACAAGCCCCCAAGTATTGGCTTGATGATGCCTGCATCCTCGACATGGACTACTTTGTGAAGACTCTCTCCGGCATCAAGGCCAAGGGGGTCCGGCCCGACTTGGTGGGCTCCATCATAGCTCACTACGCCTCCAAGTGGGTCCCAGAGCTGTCAGAGAGTAGGGATGTTGCCATGGAATTCGAGGGGGATTCAACAACATCCCCAGAGAGTGTGACTGCCAAGTGGAGGAAGAAGCGGTTCTTTGTTGAAACCCTAGTAGGAATCCTCCCCCCGGAGAATGATGCTGTCCCATGCAACTTCTTACTAAGGCTCCTAAGGGTTGCCAACATGTTAGGCATAGACTCTACTTATAAGGAGGAGCTAGAAAGGAGGGTGTCATGGCAGTTAGATCAAGCCTCATTGAAGGAGCTCATGATACCTGCTTTTAGCCACACTTGTGCTACATTGCTTGATTTTGAGCTCGTCAGGAGGTTAGTGGAAAGGTTTATAGGATTAGATGAAGGTGTTAGAAGTGGGGCCGCCTTGATTAAGGTGGCCAAATTGGTGGATTTTTACTTAGCTGAGGCAGCTGTTGATTCCAACTTGAGCTTAGAGGACTTCATGGAGCTTGCTAATGCTTTGCCTTCTCATGCTAGGGCCACAGATGATGGACTTTACCGTGCAATTGATACTTATCTCAAGGCACATCCTGGGGTGACAAAGCAAGGAAGGAAGCTCCTATGGCAATTGATTGAAACGCGAAAACTCAGTCCAGAGGCATCCCTGCATGCTTCTCAGAATGAGCGCCTGCCTATACGAGCAGTTATTCAAGTACTGTTATCTGAGCAACACAAGATCTCCAAACAGCTGGACTGGAGCGGCCCATTGGCTGGGTTGCGGAGCCCAAACCCATGTGGACTTGATGTTCCTTCTCGTTGCCTCTCGAAACGAGAGGTAACAGTCCAGCAAATGGAGATCAAGAGGTTAAAAGAAGATGTTGTCAGGCTTCAGAGCCAGATAAATGGCTTGCAGGGGCAGCTCGACAGACTAGTCGAAAAGAAGAAGGGCTTCTTTAGGTGGAGGAGATTCACATTACTATCTGGTTTCAGGAATGTTAATGACAGTGGGAGGAGTGAAGGGATTGGAGACTTGGGGGATCTTGGGTTAGGAAGTCATACACCAATTACAGTGGATCAAATGAAAGCTAAGCTTGTCAAGGGTAAAACTCCACCAAGATGGAGGAGATCCTTGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56403.p1 GENE.S_Transcript_56403~~S_Transcript_56403.p1 ORF type:complete len:430 (+),score=104.07,NPH3|PF03000.10|8.4e-76 S_Transcript_56403:449-1738(+)
MKRVTLSEPPVAGAGKPPQAPKYWLDDACILDMDYFVKTLSGIKAKGVRPDLVGSIIAHYASKWVPELSESRDVAMEFEGDSTTSPESVTAKWRKKRFFVETLVGILPPENDAVPCNFLLRLLRVANMLGIDSTYKEELERRVSWQLDQASLKELMIPAFSHTCATLLDFELVRRLVERFIGLDEGVRSGAALIKVAKLVDFYLAEAAVDSNLSLEDFMELANALPSHARATDDGLYRAIDTYLKAHPGVTKQGRKLLWQLIETRKLSPEASLHASQNERLPIRAVIQVLLSEQHKISKQLDWSGPLAGLRSPNPCGLDVPSRCLSKREVTVQQMEIKRLKEDVVRLQSQINGLQGQLDRLVEKKKGFFRWRRFTLLSGFRNVNDSGRSEGIGDLGDLGLGSHTPITVDQMKAKLVKGKTPPRWRRSLS*

Click here to download the sequence:
Link to NCBI Protein BLAST