Transcript Information: S_Transcript_56419.p1


Annotated TAIR IDAT1G14900.1
Annotated Gene Namehigh mobility group A
Annotated Gene Symbol(s)HMGA
Annotation TypeHomolog
Chromosome Positionchr1:5138665-5139353 | Reverse length=204
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8728030430612
Replicate 23.262806906393
Replicate 36.7536780024453
Condition 2: 8 Hour
Replicate 110.362337548466
Replicate 27.562315033147
Replicate 37.2053569368951
Condition 3: 24 Hour
Replicate 11.9998836998431
Replicate 24.9477335131463
Replicate 33.9076406824828


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56419.p1 GENE.S_Transcript_56419~~S_Transcript_56419.p1 ORF type:internal len:142 (+),score=8.29 S_Transcript_56419:2-424(+)
TTTAAAAAAAAAAAAAAAACAACCACTCTGTATTTCTTTCATCCTTTTTCCCAGACTTTAAATCACACTCTCTTTCTCTCCATCAAAACAACAACAAACTTCTTTCTTCTCAACCCAACATCCCATGATTCCAATCCAGTAAACCAAAACCAAAATCAAAACCAAAACTCTTGCACTTTCTTGATTCACCACTCACTTAAAAACCCTCTCTCTTTCTCTTACACTTTGTGGGGTCTCTTATTTTTCTTCTTTCTCTCTCCTAAACATCATCAATTAAAAAAAAACCACCAAAAAATTATAACATCAATGGCAACTGAAGAGATGAATAGACATCACTCCCTCCCTCCCTATCCTGAGATGATCATGACTGCAATTGATGCTTTAAATGAGAAAATGGGTTCGAACAAGACCTCAATTTCCAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56419.p1 GENE.S_Transcript_56419~~S_Transcript_56419.p1 ORF type:internal len:142 (+),score=8.29 S_Transcript_56419:2-424(+)
FKKKKKTTTLYFFHPFSQTLNHTLFLSIKTTTNFFLLNPTSHDSNPVNQNQNQNQNSCTFLIHHSLKNPLSFSYTLWGLLFFFFLSPKHHQLKKNHQKIITSMATEEMNRHHSLPPYPEMIMTAIDALNEKMGSNKTSISK

Click here to download the sequence:
Link to NCBI Protein BLAST