Transcript Information: S_Transcript_56462.p1


Annotated TAIR IDAT5G54520.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22146781-22149089 | Reverse length=457
E-Value4.3E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5171367271164
Replicate 24.8596452769856
Replicate 33.4123124031331
Condition 2: 8 Hour
Replicate 11.8788890147254
Replicate 23.2522951767003
Replicate 34.4134133807671
Condition 3: 24 Hour
Replicate 14.619182412108
Replicate 22.7955362296816
Replicate 32.111096227741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56462.p1 GENE.S_Transcript_56462~~S_Transcript_56462.p1 ORF type:complete len:227 (+),score=26.40,WD40|PF00400.28|0.43,WD40|PF00400.28|0.22,WD40|PF00400.28|0.19,WD40|PF00400.28|52,eIF2A|PF08662.7|0.01,eIF2A|PF08662.7|0.0037 S_Transcript_56462:284-964(+)
ATGGCCACTCAAAGCCAGTCAATACTGTACAGTGGTCAAATTGTCATGTGTGCAGCACATCTTTTAGCATCTGCTGGGATGGATAATGTCATTCATATATGGAATGTGTGGAATGAGCAACAGAAAAAGGCACGTGCATTCAACTATCATAAAGCAGCAGTGAAAGATGTGAGGTGGTCTCCTCAAGGACAGTTCATACTTTCTTGTGGTTATGATTGCTCGACGAGGTTAATTGACGTTGAAAAGGGGTTAGAGACCCAAACTTTCTTGGAGAACCAAGCTATTACGGCTATTGAGTTTCATCCTCACAATTATAATATCTTCTTATCTGGTGGATCAAAGGGATTCCTCAAACTTTGGGATACACGAATAGGAAAGGTGGTTCATGAATATGTAAGACACCTAGGGCCAATACTTGATGTGGAGTTTCTGGTTGACGGCAAGCAATTTATCTCTTCAAGTGACGTATCAGAAAGCAATCTTAGTGAAAATTCGCTCATTGTCTGGGATTTGTCTCGAGAGGTGCCACTCTCCAATCAGGTTTATGTAGAAGCTTACACATGTCCCAGTGTTCGATGTCACCCTTTTGAACCCTTTTTTGTGGCTCAGTCAAACGGAAACCTACATTGCTATCTTCTCCACAAAGCATCCATTCAGACTCGACAAGTACAAGCGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56462.p1 GENE.S_Transcript_56462~~S_Transcript_56462.p1 ORF type:complete len:227 (+),score=26.40,WD40|PF00400.28|0.43,WD40|PF00400.28|0.22,WD40|PF00400.28|0.19,WD40|PF00400.28|52,eIF2A|PF08662.7|0.01,eIF2A|PF08662.7|0.0037 S_Transcript_56462:284-964(+)
MATQSQSILYSGQIVMCAAHLLASAGMDNVIHIWNVWNEQQKKARAFNYHKAAVKDVRWSPQGQFILSCGYDCSTRLIDVEKGLETQTFLENQAITAIEFHPHNYNIFLSGGSKGFLKLWDTRIGKVVHEYVRHLGPILDVEFLVDGKQFISSSDVSESNLSENSLIVWDLSREVPLSNQVYVEAYTCPSVRCHPFEPFFVAQSNGNLHCYLLHKASIQTRQVQAI*

Click here to download the sequence:
Link to NCBI Protein BLAST