Transcript Information: S_Transcript_56464.p1


Annotated TAIR IDAT5G54520.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22146781-22149089 | Reverse length=457
E-Value6.5E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.643188040392
Replicate 212.337744160452
Replicate 310.980707997144
Condition 2: 8 Hour
Replicate 114.731355153283
Replicate 216.33733683559
Replicate 313.67299435188
Condition 3: 24 Hour
Replicate 111.856597947197
Replicate 210.213625611709
Replicate 310.536840919243


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56464.p1 GENE.S_Transcript_56464~~S_Transcript_56464.p1 ORF type:complete len:304 (+),score=42.57,WD40|PF00400.28|0.64,WD40|PF00400.28|0.35,WD40|PF00400.28|0.29,WD40|PF00400.28|82,WD40|PF00400.28|0.51,WD40|PF00400.28|8.8e+02,eIF2A|PF08662.7|0.019,eIF2A|PF08662.7|0.0067,eIF2A|PF08662.7|4e+02 S_Transcript_56464:284-1195(+)
ATGGCCACTCAAAGCCAGTCAATACTGTACAGTGGTCAAATTGTCATGTGTGCAGCACATCTTTTAGCATCTGCTGGGATGGATAATGTCATTCATATATGGAATGTGTGGAATGAGCAACAGAAAAAGGCACGTGCATTCAACTATCATAAAGCAGCAGTGAAAGATGTGAGGTGGTCTCCTCAAGGACAGTTCATACTTTCTTGTGGTTATGATTGCTCGACGAGGTTAATTGACGTTGAAAAGGGGTTAGAGACCCAAACTTTCTTGGAGAACCAAGCTATTACGGCTATTGAGTTTCATCCTCACAATTATAATATATTCCTATCTGGTGGATCAAAGGGCTTCCTCAAACTTTGGGATACACGAATAGGAAAGGTGGTTCATGAATATGTAAGACACCTAGGGCCAATACTTGATGTGGAGTTTCTGGTTGACGGCAAGCAATTTATCTCTTCAAGTGACGTATCAGAAAGCAATCTTAGTGAAAATTCGCTCATTGTCTGGGATTTGTCTCGAGAGGTGCCACTCTCCAATCAGGTTTATGTAGAAGCTTACACATGTCCCAGTGTTCGATGTCACCCTTTTGAACCCTTTTTTGTGGCTCAGTCAAACGGAAACTACATTGCTATCTTCTCCACAAAGCATCCATTCAGACTCGACAAGTACAAGCGATATGAATCTCATGGTGTTCTCGGGTTTCCAATCAAGTGTGGATTCAGCTTGGATGGAGAAATACTTGCATCTGGCTCCTCAGATGGAAGCATTTACTTTTACAGTGTCAGGTCTTCCAACCTCTTAAAGAAAATTGAAGTGTATGATCAACCATGTGTTGATGTCGCGTTTCATCCCCTCATGTCTAACGTGATTGCTTCGTGCAGTTGGAGTGGTGATATCTCGGTATTTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56464.p1 GENE.S_Transcript_56464~~S_Transcript_56464.p1 ORF type:complete len:304 (+),score=42.57,WD40|PF00400.28|0.64,WD40|PF00400.28|0.35,WD40|PF00400.28|0.29,WD40|PF00400.28|82,WD40|PF00400.28|0.51,WD40|PF00400.28|8.8e+02,eIF2A|PF08662.7|0.019,eIF2A|PF08662.7|0.0067,eIF2A|PF08662.7|4e+02 S_Transcript_56464:284-1195(+)
MATQSQSILYSGQIVMCAAHLLASAGMDNVIHIWNVWNEQQKKARAFNYHKAAVKDVRWSPQGQFILSCGYDCSTRLIDVEKGLETQTFLENQAITAIEFHPHNYNIFLSGGSKGFLKLWDTRIGKVVHEYVRHLGPILDVEFLVDGKQFISSSDVSESNLSENSLIVWDLSREVPLSNQVYVEAYTCPSVRCHPFEPFFVAQSNGNYIAIFSTKHPFRLDKYKRYESHGVLGFPIKCGFSLDGEILASGSSDGSIYFYSVRSSNLLKKIEVYDQPCVDVAFHPLMSNVIASCSWSGDISVFE*

Click here to download the sequence:
Link to NCBI Protein BLAST