Transcript Information: S_Transcript_56486.p1


Annotated TAIR IDAT4G23810.1
Annotated Gene NameWRKY family transcription factor
Annotated Gene Symbol(s)WRKY53, ATWRKY53
Annotation TypeOrtholog
Chromosome Positionchr4:12392666-12393739 | Reverse length=324
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9136766522324
Replicate 26.3778147964581
Replicate 36.1992390196977
Condition 2: 8 Hour
Replicate 17.6341313236123
Replicate 27.9523461971465
Replicate 37.8814898707494
Condition 3: 24 Hour
Replicate 17.2510327552813
Replicate 25.4850233058723
Replicate 36.2101336224361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56486.p1 GENE.S_Transcript_56486~~S_Transcript_56486.p1 ORF type:complete len:1190 (+),score=207.48,NB-ARC|PF00931.18|1e-54,WRKY|PF03106.11|1e-21,LRR_8|PF13855.2|1.9e-09,LRR_8|PF13855.2|0.14,LRR_8|PF13855.2|2.4e+03 S_Transcript_56486:359-3928(+)
ATGGAGAAGGTAGGAAGTGAGGAGAGAGAAAAGAACAAAGAATTTGAAGTTGGGAACACGCGGCTTTCAATAGTGCCCACATCATATGCATCTAATTCCGATGCAGTAATAATGAGCTTTTCCCCTGAAAATCACCATGATGATCCTGGCAAAAGAAAATTATGCAAAGTATTGCCCCAACACAGCCATTACCTCCCAAACAAATCTAGAAGATCCAACACTCCAAATGGCCGTGAAGCACAAAAAAGTGTTGTCGTACTAAAGGATCTTGTTGATGATGGATATGGCTGGAGGAAATATGGACAAAAAGATATATTGGGAGCCAAATTTCCACGGGAATATTATAGGTGTACATATCGTGATGACCAAGGCTGTTATGCTACGAAGATGGTGCAAAGAGTTAATGAAGCCAATGGTTACGAAATCACCTATAGGGGACGGCATACTTGTCGTATAAGGTCTTCTCTTACAGCGGAAACTATTGGTGAGGAGTTTTCAATTGGATCCTATTCAATAACTGAATATTGGGGTTCAAGGGAACTTGCAGCTGTAAGTCCATCCTTTTGTGAAAGAGATGCGGAAATGAGTGGTTCTGAAAATCATAATGGTACTATAAGCAATGAAATTCGACATGATGAACCCGCTATTTCATCAATAGCAGCTCATAAGGAGTTTGATAAGCAGTGGTCAACTGTCTCAGCCTTTAGTGCAAGTCACAAAGCTACAAAAGGTTCCGGCAATGCAATCAAATTACTTGATTTTTCCCATTCCATGAGCACAGTTGATAATCTTGGTGTATCGAAGGAACAGGGCAATCTTCTTTCTAGCCCGAAACTGGGATCCAGTAGAACAACTGAGTGCACTCTGCATAAGCTTATGGTGGCTGTTAAGGATGTAAAGGCCAGGAAGATTGGTATATATGGACATGGTGGAATTGGAAAAACAACAGTGATGAAGGCCCTTTTCTCTGAATGTGTAATGAAGAGATTGTTTGATTTGGTTCTTTGGGTATCTACATCGAGGTGTTCTTCAAGAAGAAAGATACTGAATGCATTAGTCCAGCAGCTGTCCTTGAATGTGTCAAATTTCAAATCTGATGATGAACTTGCAATAATCCTTAATCAAGCTCTTCAATCACGAAATTTTGTCCTATTTTTCGATGATGTCTGGGATTTTATGGATCTGCAAAATGTAGGAATTCCTATTGCTAGCCAGGAAAACAACTACAAGATCATTCTGACAACCAGATCATTGAATATTTGTCATGCCATGGAAGTGGATACAATTATCAAAGCAGAAGCCCTATCTAGGGAAGAAGCTTTACAATTATTCCATGTTCAAGTGGGTGACGTGATGGATTCCCAAGACATAAGCCCGTATGCTCGAGCAATTGTTGAGGAGTGTTGTGGTTTGCCTTTGACAATCAAAGTTGTAGGAAGAGCTTTAAGTATGGATAATAGTGTTCTTACATGGAAGCTTGCTCTCAAGGAAGTTCTTTTGAACAATAACATTGGAATACTCAGACTTGGATACAATAGGCTTAAAGCACAGGATGTTAAGAGTTGCTTCCTCTACTCTGTATTATTTGCAGAAGGTAAGGCGATTGGACATTCTTCTCTTGTGGAGTACTTGATTGATGAAGGCTTTATTGCAGGTAGTATGTCAGATGCACGTAGAAGAGGAAGTGATATCATCAACTTTCTTGTTGATGCTTCCCTCTTGGAGTGCAGTGATGATGGGTCCATGGTTAAAATGCATGATACTATACGTGATTTGGCATTGATGATCTTGCTCTCAGATGAAGAAGGTTTACGACTTCTATTGAGCCGTTATCTTTTGTCAATAGAATCACAAAAAGCCCTTCCTTTGGGCATATCTAGTCCTACAATTACATTACCTGAAACTTCTGAATCAGCAGATTATTCACCTACGGAAGGTCACCTATCTGTCCTAACTGCTACTGAAGGGCTTAATGAAGCACCCTCAGAGAAACAGTGGGAAGAATCAAGAATTGCCTGCCTTATGGATAGTGCAATTTCAAGCCTACCTAAGAGTCCGGCATGTTCAAAATTAGTAACATTGTTTCTCCAGAGGAATAGTAATTTGAGAGCCATTCCACATTCTTTCTTCGAGCACATGTCTTCTCTTCAAATTTTGAATCTCTCCAAAACACGAATCAAGTCTTTACCACAGTCCCTTTCCAAACTCCAATGCTTGCAGATACTAATTATGCGGAACTGTGAACGTTTGCAGTTCCTCCCCCCAGTGATTGGAGCTCTCAAAAATCTGTTGGTGCTTGATCTCCATGGCACAGAAATATGCGAACTGCCTGTAGAAATCAGTGAGTTGCGCTGTTTAACATGTCTTAATGTAAACTTCTATGGAGCAATTGATCAAAATGAGTATGGCATGCTGCCATCACAGTTGATCTCTAAGGGAATAATTTCTAACCTTAATGAGTTAAGAGAACTCGGCATAGTTGTACATCCAGGAGATGCACGATGGACTAAGGGCGTGCTAGATGTGATGATGGAAGTAAACAGCTTAAAATTGCGTACCCTGTCATTTCATTTTCCTGAGATCAAACATCTTGAGCATTTCATCAATAAAAGTACTTCTTGGGCTCAAAGAACCTTGAGTCATTTCAATTTTATTGTTGGCCATGATGTCAAGCGAATGGTTTCTCATATTGCTTATGATCTTGAACACAAATATGCTCAGCAGGACCGATGCCTGAGATTTGTGAACTGTGAGGATGTACCTGAAGCAGTTGGGAAGGTACTTTCTGAAGCCACAGCATTTTATTTAGATCATCACCTAAAGGTTCACTCGTTGACACAACTTGGATATACTAATTTCAATAAGTTGAAGTTCTGCATAGTGAGGGATTGCCCACAGTTAAAAGCAATAGCGAATTGCAGGAAGGGGAAAGGGAGCTGTTTCCCATATCTGGAGCATTTGAGCATCCACTACTTATCGGGCTTGAGAAAGATTTGGGTTGGTCCTGCACGAGCTGGAAGTTTCTCAATGCTAAGACGATTATCAGTGATTTCATGCCCGAGATTGGAATACCTTCTTTCGCATTCCATGGTTGCAGCGCTTTCTAGCTTGGAAGAGTTGATTGTTGAGGACTGCCTATCCTTGAGAAATCTTGTTATCAATCAGGACCAGTGTTCCTTTGATGATGACATAATTGATAGAGATTTTACTGAATCTAGTGTTGCCAATAGTAATGACACAATTGTAGATGATACTGATGTTGAAATGGAAGTTATGCCTACTGCTGGAAGTACAGTCCTTAGGATAAAGGTACTCAAACTCATTTATCTTCCAAAGCTGGAACATATTTGGAGTGGTGGGAACTGTCCTTGCTTAGAGTACCTCAGTGTGTACAACTGTCCCAGTTTGAGAAATCTTTGTCTGAAAGCGGAATCCAATATCACCCTAAAGGAGATGAAAATTGAAACTACTTGGTGGGATAGGTTGGAGTGGCAAGACCCTGTTCTACGAGAAAAACTGCAGGGCCATGTGCAGGAAATCAGCCCGGAAGACATATGGGGCAAGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56486.p1 GENE.S_Transcript_56486~~S_Transcript_56486.p1 ORF type:complete len:1190 (+),score=207.48,NB-ARC|PF00931.18|1e-54,WRKY|PF03106.11|1e-21,LRR_8|PF13855.2|1.9e-09,LRR_8|PF13855.2|0.14,LRR_8|PF13855.2|2.4e+03 S_Transcript_56486:359-3928(+)
MEKVGSEEREKNKEFEVGNTRLSIVPTSYASNSDAVIMSFSPENHHDDPGKRKLCKVLPQHSHYLPNKSRRSNTPNGREAQKSVVVLKDLVDDGYGWRKYGQKDILGAKFPREYYRCTYRDDQGCYATKMVQRVNEANGYEITYRGRHTCRIRSSLTAETIGEEFSIGSYSITEYWGSRELAAVSPSFCERDAEMSGSENHNGTISNEIRHDEPAISSIAAHKEFDKQWSTVSAFSASHKATKGSGNAIKLLDFSHSMSTVDNLGVSKEQGNLLSSPKLGSSRTTECTLHKLMVAVKDVKARKIGIYGHGGIGKTTVMKALFSECVMKRLFDLVLWVSTSRCSSRRKILNALVQQLSLNVSNFKSDDELAIILNQALQSRNFVLFFDDVWDFMDLQNVGIPIASQENNYKIILTTRSLNICHAMEVDTIIKAEALSREEALQLFHVQVGDVMDSQDISPYARAIVEECCGLPLTIKVVGRALSMDNSVLTWKLALKEVLLNNNIGILRLGYNRLKAQDVKSCFLYSVLFAEGKAIGHSSLVEYLIDEGFIAGSMSDARRRGSDIINFLVDASLLECSDDGSMVKMHDTIRDLALMILLSDEEGLRLLLSRYLLSIESQKALPLGISSPTITLPETSESADYSPTEGHLSVLTATEGLNEAPSEKQWEESRIACLMDSAISSLPKSPACSKLVTLFLQRNSNLRAIPHSFFEHMSSLQILNLSKTRIKSLPQSLSKLQCLQILIMRNCERLQFLPPVIGALKNLLVLDLHGTEICELPVEISELRCLTCLNVNFYGAIDQNEYGMLPSQLISKGIISNLNELRELGIVVHPGDARWTKGVLDVMMEVNSLKLRTLSFHFPEIKHLEHFINKSTSWAQRTLSHFNFIVGHDVKRMVSHIAYDLEHKYAQQDRCLRFVNCEDVPEAVGKVLSEATAFYLDHHLKVHSLTQLGYTNFNKLKFCIVRDCPQLKAIANCRKGKGSCFPYLEHLSIHYLSGLRKIWVGPARAGSFSMLRRLSVISCPRLEYLLSHSMVAALSSLEELIVEDCLSLRNLVINQDQCSFDDDIIDRDFTESSVANSNDTIVDDTDVEMEVMPTAGSTVLRIKVLKLIYLPKLEHIWSGGNCPCLEYLSVYNCPSLRNLCLKAESNITLKEMKIETTWWDRLEWQDPVLREKLQGHVQEISPEDIWGKV*

Click here to download the sequence:
Link to NCBI Protein BLAST