Transcript Information: S_Transcript_56505.p2


Annotated TAIR IDAT5G35080.1
Annotated Gene NameINVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13354552-13356725 | Reverse length=282
E-Value3.6E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85848391081227
Replicate 20
Replicate 30.79323596058497
Condition 2: 8 Hour
Replicate 10.22930527222724
Replicate 20
Replicate 30.22920266241915
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56505.p2 GENE.S_Transcript_56505~~S_Transcript_56505.p2 ORF type:3prime_partial len:93 (+),score=8.46 S_Transcript_56505:1774-2049(+)
ATGAAGAGCAGAGGCGCTACTCATGTTGATTTATGCAGGTATCATGCTCATCAATTTACCAATGGAACAACTTGTGACCTTACAAATGATCCTCGAGAAACAGAGGTTAGATTTGTATGTTCAGAGGGCAGATCCATGATTACTTCCATTACAGAGTTGTCCACATGCAAATATGCGCTCACAGTTCAGTCTCAAATGCTTTGTGCACATCCGCTTTTCCAAGAAGAGCGGCCAGTTTGGCATGCCATTCATTGTAATGTGCTTCGCGAGGATACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56505.p2 GENE.S_Transcript_56505~~S_Transcript_56505.p2 ORF type:3prime_partial len:93 (+),score=8.46 S_Transcript_56505:1774-2049(+)
MKSRGATHVDLCRYHAHQFTNGTTCDLTNDPRETEVRFVCSEGRSMITSITELSTCKYALTVQSQMLCAHPLFQEERPVWHAIHCNVLREDT

Click here to download the sequence:
Link to NCBI Protein BLAST