Transcript Information: S_Transcript_56544.p1


Annotated TAIR IDAT1G20200.1
Annotated Gene NamePAM domain (PCI/PINT associated module) protein
Annotated Gene Symbol(s)EMB2719, HAP15
Annotation TypeOrtholog
Chromosome Positionchr1:7001409-7004154 | Reverse length=488
E-Value6.1E-265
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.144026449482
Replicate 236.049425064324
Replicate 336.998617787346
Condition 2: 8 Hour
Replicate 141.386084684988
Replicate 235.86815814631
Replicate 334.78537093819
Condition 3: 24 Hour
Replicate 136.140103770738
Replicate 234.01889099599
Replicate 334.093601946384


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56544.p1 GENE.S_Transcript_56544~~S_Transcript_56544.p1 ORF type:complete len:489 (+),score=116.84,Rpn3_C|PF08375.7|1.9e-27,PCI|PF01399.23|6.3e+03,PCI|PF01399.23|8.6e-23 S_Transcript_56544:353-1819(+)
ATGACTCAAGATGTGGAGATGCAGGACACTCATGCTCCTTCTAATTCTCTCTCGTCAACGGATCCACCTACCTTGAAGCATTTGAAGGAAATTGCGTCTCTAATGGAGTCAGGTTCATACACCAAGGATACTCGTCGAATTTCTCGTGCTGTTAGACTCATCTTTGGAGTTCGCCGTGATGTTACGGCTCGTGTTCTGTTGTTTTTCCTTGATTATGCTCTTGGTTCTTCTTCTGAGGCTTATACCAAATTGTTTGGATTTCTTCCTAAGGTAGTTGACCATGAGATGGAAGTTTCTAGAATTTATGCTGCAACATCTGCGGTACAATCTTCTGAAAAGAGCTCATCGCCAGAGCTTGAAATTTATTGCTACTTGCTTGTATTGTTGTTTCTGATTGATCAGAAAATGTTTAATGAGGCAAAAGCTTGTGCTTCTGCAAGCGTAGCCCGTTTGAAGTTGTTGAAGAGGGCTGATGTTTTAGCATCCAAATTGTATTCCTTTTATTCATTGAGCTATGAGCTTACTGGTGATCTTGCTGAAATTCGTGGTGAACTCCTCATCTTGCACCGTTTGGCGATCTTGCACCATGATGAACTTGGTCAGGAAACACTTCTTAACCTGCTTCTACGCAACTACCTACATTACAATTTGTATGATTTGGCTGAGAAGCTGAGATCGAAGGCACCAAGCTTTGGGGCCCACTCAAATCAGCAGCATTGTCGGTATCTCTACTATGTTGGAAAGATCCAGACAATTCAATTGGAATATACAGATGCGAAGGAAAGCCTTCTTCAGGCTGCTAGGAAAGCCCCTGTTGCAGCTCGTGGTTTTAGGATTCAGTGCAACAAATGGGCTGTGATAGTGCGATTATTGTTGGGTGAAATACCCGAGAGAACTATTTTTATGCAGAAAGGCATGGAGAAGGCGTTGCGACCTTACTTTGAGCTTACAAATGCTGTTCGTATTGGTGACTTGGATCTGTTCAGAAAGGTTACTGAAAAGTTCTCGGATACTTTCAATAAAGATGGGACTCATAATTTGATTGTCCGTCTGAGGCACAATGTCATCAGAACCGGATTGAGAAACATCAGTATCTCTTATTCCCGCATCTCACTTGCTGATGTTGCTAAGAAGCTGAGATTGGATTCGCCCAACCCTGTTGCTGATGCTGAGAGCATTGTGGCCAAGGCTATTCGGGATGGTGCAATAGATGCTACATTAGATCATGGAAATGGGTGGATGCTGTCTAAGGAGACAGGTGATATCTACTCAACAACTGAACCACAATCTGCCTTTGACTCTAGAATTGCATTCTGTCTTAACATGCACAATGAAGCCGTACGGGCACTGCGATACCCACCAAACTCACACAAGGAGAAAGAAAGTGCTGAGAAGAGGAGGAAAAGGCAACAACAGGAGCAAGAACTTGCCAAGCATATTGCTGAGGAGGAGGATGATGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56544.p1 GENE.S_Transcript_56544~~S_Transcript_56544.p1 ORF type:complete len:489 (+),score=116.84,Rpn3_C|PF08375.7|1.9e-27,PCI|PF01399.23|6.3e+03,PCI|PF01399.23|8.6e-23 S_Transcript_56544:353-1819(+)
MTQDVEMQDTHAPSNSLSSTDPPTLKHLKEIASLMESGSYTKDTRRISRAVRLIFGVRRDVTARVLLFFLDYALGSSSEAYTKLFGFLPKVVDHEMEVSRIYAATSAVQSSEKSSSPELEIYCYLLVLLFLIDQKMFNEAKACASASVARLKLLKRADVLASKLYSFYSLSYELTGDLAEIRGELLILHRLAILHHDELGQETLLNLLLRNYLHYNLYDLAEKLRSKAPSFGAHSNQQHCRYLYYVGKIQTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAVIVRLLLGEIPERTIFMQKGMEKALRPYFELTNAVRIGDLDLFRKVTEKFSDTFNKDGTHNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSPNPVADAESIVAKAIRDGAIDATLDHGNGWMLSKETGDIYSTTEPQSAFDSRIAFCLNMHNEAVRALRYPPNSHKEKESAEKRRKRQQQEQELAKHIAEEEDDDF*

Click here to download the sequence:
Link to NCBI Protein BLAST