Transcript Information: S_Transcript_56546.p1


Annotated TAIR IDAT1G20200.1
Annotated Gene NamePAM domain (PCI/PINT associated module) protein
Annotated Gene Symbol(s)EMB2719, HAP15
Annotation TypeOrtholog
Chromosome Positionchr1:7001409-7004154 | Reverse length=488
E-Value1.7E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.261048719884
Replicate 216.312381640928
Replicate 316.578842543237
Condition 2: 8 Hour
Replicate 121.098524462695
Replicate 218.563874403177
Replicate 321.315847604981
Condition 3: 24 Hour
Replicate 118.126605449642
Replicate 215.310128032958
Replicate 317.306615575851


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56546.p1 GENE.S_Transcript_56546~~S_Transcript_56546.p1 ORF type:complete len:188 (+),score=45.96,Rpn3_C|PF08375.7|1e+04,Rpn3_C|PF08375.7|3.7e-28,PCI|PF01399.23|2.8e-22 S_Transcript_56546:1430-1993(+)
ATGCAGAAAGGCATGGAGAAGGTGTTGCGACCTTACTTTGAGCTTACTAATGCGGTTCGTATTGGTGACTTAGAGCTGTTCAGAAGGGTGACTGAAAAATTCTCAAGTACTTTCGATAAAGATCGGACTCATAATTTGATTATCCGTCTGAGGCACAATGTCATCAGGACCGGATTGAGAAACATCAGCATTTCTTATTCCCGCATCTCACTTACTGACGTTGCCAAGAAGCTGAGATTGGATTCTGCAAACCCTGTTGCTGATGCCGAGAGCATTGTGGCCAAGGCTATTCGTGATGGTGCAATCGATGCTACATTAGATCATGCAAATGGTTGGATGCTGTCTAAGGAGACTGGTGACATTTACTCAACGACTGAGCCACAGTCTGCCTTTGACTCTAGAATTGCATTCTGTCTTAACATGCACAATGAAGCCGTACGGGCACTGCGATACCCACCAAACTCACACAAGGAGAAAGAAAGTGCTGAGAAGAGGAGGAAAAGGCAACAACAGGAGCAAGAACTTGCCAAGCATATTGCTGAGGAGGAGGATGATGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56546.p1 GENE.S_Transcript_56546~~S_Transcript_56546.p1 ORF type:complete len:188 (+),score=45.96,Rpn3_C|PF08375.7|1e+04,Rpn3_C|PF08375.7|3.7e-28,PCI|PF01399.23|2.8e-22 S_Transcript_56546:1430-1993(+)
MQKGMEKVLRPYFELTNAVRIGDLELFRRVTEKFSSTFDKDRTHNLIIRLRHNVIRTGLRNISISYSRISLTDVAKKLRLDSANPVADAESIVAKAIRDGAIDATLDHANGWMLSKETGDIYSTTEPQSAFDSRIAFCLNMHNEAVRALRYPPNSHKEKESAEKRRKRQQQEQELAKHIAEEEDDDF*

Click here to download the sequence:
Link to NCBI Protein BLAST