Transcript Information: S_Transcript_56670.p1


Annotated TAIR IDAT4G30200.2
Annotated Gene Namevernalization5/VIN3-like
Annotated Gene Symbol(s)VEL1, VIL2
Annotation TypeOrtholog
Chromosome Positionchr4:14786852-14790070 | Reverse length=714
E-Value1.8E-196
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.739268043521
Replicate 217.540223277027
Replicate 317.395433896028
Condition 2: 8 Hour
Replicate 119.789489629472
Replicate 220.171846903687
Replicate 319.869204207967
Condition 3: 24 Hour
Replicate 114.704450659874
Replicate 215.695160371432
Replicate 315.440642142744


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56670.p1 GENE.S_Transcript_56670~~S_Transcript_56670.p1 ORF type:complete len:722 (+),score=151.30,PHD_Oberon|PF07227.7|1.1e-34,PHD_Oberon|PF07227.7|5.3e+03,PHD_Oberon|PF07227.7|9.3e+03,fn3|PF00041.17|3.5e-06 S_Transcript_56670:393-2558(+)
ATGGATTCTCCTTTTGAGGGGGCTGTGCTTGATCCTGTAAAATGTAGTAAGTTGAGTATGGAGGAAAGAAGAGAAATTGTGTATGAATTGGCCAATTGGTCACATGGTGCGGCAGAAATGCTACAATCTTGGAGCAGGCAAGACATTTTGCAAATTTTGTGTGCAGAGATGGGGAAAGAGAGGAAATATACTGGTTTGACAAAGCTGAAAATCATAGAACACCTCCTAAAAGTTGTTTCTGAAAAGAAGACAGATGACCAGAAGGGTGGGATTTTAGAACAACAACCTTCACCTTCAGCTTCCGTTGCCAATAAGGCTTCGAAGAAGCCGAGGAAACCTGATCATCCTTCTCATGTTCCTGTCTCTACTCCTAATGTTTACACGTTGAATGGAGATAGTGATTCAGGCACTGTGACTTGCAAAAATGCTGCTTGTAAGGCTCGATTAAAGAAGGAGGATGCATTTTGCAGGAGGTGCTCATGCTGTATATGTCACAAGTACGATGATAATAAGGATCCAAGTTTATGGCTGACCTGCAGCTCGGAGCCTCCTTTTCAGGGAGAATCATGTAACATGTCTTGTCATCTTGAGTGTGCTCTCAAACATGAAAGAGCCGGGATTGCAAAAAATGGGCTTGTGTCACAATTGGATGGGAGCTTTTACTGTGTCTCTTGCGGAAAGATGAATGATTTGATGAGATGCTGGAGGAAACAACTAATGGTTGCAAAGGATACCAGACGAGTGGACATTCTATGTTATCGTGTCGCCCTGAGCCACAAGTTGCTGTCTGGAACAAAGAAGTACCAGGCGCTTTGTGACATTGTTGAGGAAGCAATTAAGCACCTTGAAGCAGAAGTAGGTACCTTAACTGGTATTCCTGTTAAGATGGGTAGAGGTATCGTCAACAGGCTGTCTTCAGGACAAGAAGTTCAGCGACTCTGTGCTTCTGCTGTAGCATCATATGACTCAACGATTTGTTGCACACCATTGCACGAAGATTCAAAGATGAGTACTCCGAGTATATTCAGAGTCGAAGACATTAGTGCAACGTCTGTCACTGTGATGTTGGGTCCTGACAGTACATTGGAAAACAATATAGGTTATACACTGTGGCATCAGAAGGCTGATGACAAGAAAGAAATAGCAGAGCCGACTTGTACGCTGTGTCCCCCTCAAACAAAGTTCATAGTCTCGGGACTCTCTCCAGCAACAGAATACATTTTCAAGGTTGTTTCCTCTGTTAACACAAAAGAGTTGAGCTCTTCTGTAGTCCGAGTCACAACTAGCATTTCGGCTGGTAATGATGCCAGGTGCCTGACAATGGAAAGAACTCAGAGCCCAATAACCAACTGCAGCACCCTTTCTAATCCTTCTTCTGTGGAAGACGAAACAAATAACATTGCTCCCTGCAGTGAATTGAACGAGAACAAAGACGAAAATTATTTCAATTACTACAAGATTGACAAGAAGATTGTTGATCCAAATTCATCGAGTGAGCCAGTCAACTCGACAAATGCCAGTCATGATCAAAACCCTTCTTGTGCATCAGATGAGGAGCATGCAACAGGAAAATTTGATTCTGGTGGACAACCTGATGGTGGAAAACCTGAAGTCAAACATCCGACAGACGGTCAAAATGGTGAAGCAATGAGCACTGACAATGAATCAGAAAGGAATGGTCTGTTGTTGGTGCCGCGTGTGAACCTGGAAACAAGCTTGCCAATAACTCCTTGCAGGCTAGAAAGCTTGAAGGATGGGCCTGCAAAGAAGGCAGGACAAAAATCCCATAATAAGACTCAAGAGGGTGTAGGAAAGGGGAAGGAGGTGCATGCAAGAAGCTCATCCAAGAAAAGATGCTTGGAGAGCCAAGAAGAGGAGTGTGTCGGAAATTGCCCTTCAGGCGAGAGCTTGGAATACTACATAAAGGTAATTCGCTGGCTTGAATGTGAGGGTCATATTGACAAAAGCTTCAGGCAGAAATTCTTGACTTGGTATAGCATTAGGGCAACCCCTCAAGAAACAAGGATTGTCAAGGCATTTGTTGATACCCTAATTGATGACCCTGCATCTCTGTCGGAGCAACTTCTAGATACTTTTGGGGAGATAGTCTCTAGCAAGAAATCTTCTGTCGTCCCACCTGGCTTCTGCTTGAAGCTTTGGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56670.p1 GENE.S_Transcript_56670~~S_Transcript_56670.p1 ORF type:complete len:722 (+),score=151.30,PHD_Oberon|PF07227.7|1.1e-34,PHD_Oberon|PF07227.7|5.3e+03,PHD_Oberon|PF07227.7|9.3e+03,fn3|PF00041.17|3.5e-06 S_Transcript_56670:393-2558(+)
MDSPFEGAVLDPVKCSKLSMEERREIVYELANWSHGAAEMLQSWSRQDILQILCAEMGKERKYTGLTKLKIIEHLLKVVSEKKTDDQKGGILEQQPSPSASVANKASKKPRKPDHPSHVPVSTPNVYTLNGDSDSGTVTCKNAACKARLKKEDAFCRRCSCCICHKYDDNKDPSLWLTCSSEPPFQGESCNMSCHLECALKHERAGIAKNGLVSQLDGSFYCVSCGKMNDLMRCWRKQLMVAKDTRRVDILCYRVALSHKLLSGTKKYQALCDIVEEAIKHLEAEVGTLTGIPVKMGRGIVNRLSSGQEVQRLCASAVASYDSTICCTPLHEDSKMSTPSIFRVEDISATSVTVMLGPDSTLENNIGYTLWHQKADDKKEIAEPTCTLCPPQTKFIVSGLSPATEYIFKVVSSVNTKELSSSVVRVTTSISAGNDARCLTMERTQSPITNCSTLSNPSSVEDETNNIAPCSELNENKDENYFNYYKIDKKIVDPNSSSEPVNSTNASHDQNPSCASDEEHATGKFDSGGQPDGGKPEVKHPTDGQNGEAMSTDNESERNGLLLVPRVNLETSLPITPCRLESLKDGPAKKAGQKSHNKTQEGVGKGKEVHARSSSKKRCLESQEEECVGNCPSGESLEYYIKVIRWLECEGHIDKSFRQKFLTWYSIRATPQETRIVKAFVDTLIDDPASLSEQLLDTFGEIVSSKKSSVVPPGFCLKLWH*

Click here to download the sequence:
Link to NCBI Protein BLAST