Transcript Information: S_Transcript_56709.p1


Annotated TAIR IDAT5G20350.1
Annotated Gene NameAnkyrin repeat family protein with DHHC zinc finger domain
Annotated Gene Symbol(s)TIP1
Annotation TypeOrtholog
Chromosome Positionchr5:6876772-6881102 | Forward length=620
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.48149231059
Replicate 219.846280560237
Replicate 321.635296271179
Condition 2: 8 Hour
Replicate 129.235890589331
Replicate 230.221013463866
Replicate 323.62204440923
Condition 3: 24 Hour
Replicate 119.346396043447
Replicate 217.129217713808
Replicate 319.257635140846


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56709.p1 GENE.S_Transcript_56709~~S_Transcript_56709.p1 ORF type:complete len:647 (+),score=137.96,zf-DHHC|PF01529.16|9.6e+02,zf-DHHC|PF01529.16|2.7e-32,Ank_2|PF12796.3|3.2e-10,Ank_2|PF12796.3|1.1e-13,Ank_2|PF12796.3|1.5e+02,Ank_5|PF13857.2|7.9,Ank_5|PF13857.2|7.2e-05,Ank_5|PF13857.2|2.8e-07,Ank_5|PF13857.2|0.001,Ank_5|PF13857.2|1.7e-05,Ank_5|PF13857.2|1.6e-06,Ank_4|PF13637.2|0.018,Ank_4|PF13637.2|1.1e-06,Ank_4|PF13637.2|4.1e-05,Ank_4|PF13637.2|1.6e-06,Ank_4|PF13637.2|1.2e+04,Ank_3|PF13606.2|8.9e+02,Ank_3|PF13606.2|0.0085,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|5.7e+02,Ank_3|PF13606.2|0.29,Ank_3|PF13606.2|0.01,Ank_3|PF13606.2|88,Ank|PF00023.26|2.3,Ank|PF00023.26|0.023,Ank|PF00023.26|3.8e+03,Ank|PF00023.26|0.009,Ank|PF00023.26|0.039 S_Transcript_56709:280-2220(+)
ATGTCGTCGGAGATCGAGGTGGTGGAGGAGTATACGGCGGAAACCCGAGATCGGGGGGCGTCATCATCGACGTCATCAACATCGGGAATGGTGAATGGTAATAATAACGGAGAGGAAGAGAGGTTGAGGGAGGACGTGTACACAGCAGCAGCATATGGAGATATGGAGAAACTGGAAAGGCTGGTGGAGAGAGAGGGGTGTTCAGTATCAGAACCTGATGGCCTCGGTTACTACGCTTTGCAGTGGGCTGCCCTCAACAATCGTACTGCTGCTGCCCGCTACATTCTTGAGCACGGTGGAGATGTGAATGCAGCGGATCACACTGGTCAGACAGCATTGCATTGGAGTGCAGTACGAGGAGCAGTCCAGGTTGCAGAGCTCCTTCTGCAAGAGGGTGCTCGGGTTAACACCGCCGATATGTATGGTTATCAGACAACACATGTTGCCGCCCAGTATGGCCAGACAGCTTTCCTTTATCACATTGTCATGAAGTGGAATGCTGATCCAGATGTTCCAGATAATGATGGAAGAAGTCCTTTGCACTGGGCAGCGTACAAAGGCTTTGCTGATTGTATTCGTCTTCTTCTATTTTTGGATGCTTATCGAGGGCGTCAAGATAAAGAAGGTTGTACCCCTCTTCATTGGGCTGCAATTAGGGGAAACTTGGAGGCATGCACGGTTTTGGTACAGGCTGGAAAGAAAGAAGACCTAACTGTGGCAGATAATACTGGCCTAACTCCAGCACAGTTGGCTGCAGAAAAGAATCACAGACAAGTTGCTTTTTTCCTTGGAAATGCCCGTAGGCTACTTGAAAGACGCTGTGATGGGAACAGCCGGCTTGGGAAGCTTTCAAAATTAGGGCTTGCACCTGTCCTGTGGTTTATGATTTTCTTGTTGCTTGCAATGTACACGCACTCAGTCATCTTGGACTCAGAGTTTCCAAGGTTAACCTTGGGATTTGGCCTTGTTGCATGGCTTGGTGTTTTTCTAGCTTCTGGTGGACTAGTTATGTTCTATAGGTGCAGCAGAAAGGATCCAGGTTTTATCAGAATGAATGTGCATGATGCTCAAAACATGAAAGATGATGAACCATTGCTGAAGATTGAGATAGACAATCCAGCTCTGCTGGCTGGAAACTGGTCTCAACTCTGCATAACATGCAAGATAGTCAGACCTCTTCGCGCAAAGCATTGTTCAACCTGTGATCGTTGTGTTGAGCAATTCGATCATCACTGTCCTTGGGTATCAAATTGCATTGGCAAGAAAAACAAAAGGGATTTCTTCTTGTTTCTTGTGCTGGAAGTTGCTGCGATGCTGATGACTGGTCTAGTCACCCTTATAAGGATATTGACTGATCCAATGGCTCCATCTTCTTTTGGAGCATGGCTTAATTATGCTGGTACTCATCATACTGGTGCTATAGCATTCCTGGTTGCTGATTTCTTCCTCTTTTTTGGGGTGGCAGTATTAACAATTTTGCAGGCTTCTCAGATTTCTCGCAATATAACTACAAATGAAATGGCAAATGCAATGCGTTACAGCTACTTGAGAGGTTCTGGTGGTCGGTTCAGAAACCCATTTGATCATGGGGTTCGGAAGAATTGTTCCGATTTTTTGATCAATGGGTACAATGAAGATGTGGAGTGTGCTGAAGATTCAACTAATGATGATGAAATTGGAATGACACATATGCCAAGCAACACGAACCTGCATAATGGGTTAGTCCATTCTCATCAAACCAATGGCAGTGGTCATGTTGCTATTAATGTGAATTCAAAGAACTCAAAAACTGCTCATGGCCATGCTCATTCACATTGTAATCATCAGCATAGTCACGGAAGAAATGGTGTTCCTCTGGGCTTGGGAGAAGCAATTCACGATCAGTTACAGCATCATGATACATGCCCATTGGAAATGAAATTGTTTACCATGTTTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56709.p1 GENE.S_Transcript_56709~~S_Transcript_56709.p1 ORF type:complete len:647 (+),score=137.96,zf-DHHC|PF01529.16|9.6e+02,zf-DHHC|PF01529.16|2.7e-32,Ank_2|PF12796.3|3.2e-10,Ank_2|PF12796.3|1.1e-13,Ank_2|PF12796.3|1.5e+02,Ank_5|PF13857.2|7.9,Ank_5|PF13857.2|7.2e-05,Ank_5|PF13857.2|2.8e-07,Ank_5|PF13857.2|0.001,Ank_5|PF13857.2|1.7e-05,Ank_5|PF13857.2|1.6e-06,Ank_4|PF13637.2|0.018,Ank_4|PF13637.2|1.1e-06,Ank_4|PF13637.2|4.1e-05,Ank_4|PF13637.2|1.6e-06,Ank_4|PF13637.2|1.2e+04,Ank_3|PF13606.2|8.9e+02,Ank_3|PF13606.2|0.0085,Ank_3|PF13606.2|0.042,Ank_3|PF13606.2|5.7e+02,Ank_3|PF13606.2|0.29,Ank_3|PF13606.2|0.01,Ank_3|PF13606.2|88,Ank|PF00023.26|2.3,Ank|PF00023.26|0.023,Ank|PF00023.26|3.8e+03,Ank|PF00023.26|0.009,Ank|PF00023.26|0.039 S_Transcript_56709:280-2220(+)
MSSEIEVVEEYTAETRDRGASSSTSSTSGMVNGNNNGEEERLREDVYTAAAYGDMEKLERLVEREGCSVSEPDGLGYYALQWAALNNRTAAARYILEHGGDVNAADHTGQTALHWSAVRGAVQVAELLLQEGARVNTADMYGYQTTHVAAQYGQTAFLYHIVMKWNADPDVPDNDGRSPLHWAAYKGFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLTVADNTGLTPAQLAAEKNHRQVAFFLGNARRLLERRCDGNSRLGKLSKLGLAPVLWFMIFLLLAMYTHSVILDSEFPRLTLGFGLVAWLGVFLASGGLVMFYRCSRKDPGFIRMNVHDAQNMKDDEPLLKIEIDNPALLAGNWSQLCITCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKRDFFLFLVLEVAAMLMTGLVTLIRILTDPMAPSSFGAWLNYAGTHHTGAIAFLVADFFLFFGVAVLTILQASQISRNITTNEMANAMRYSYLRGSGGRFRNPFDHGVRKNCSDFLINGYNEDVECAEDSTNDDEIGMTHMPSNTNLHNGLVHSHQTNGSGHVAINVNSKNSKTAHGHAHSHCNHQHSHGRNGVPLGLGEAIHDQLQHHDTCPLEMKLFTMFI*

Click here to download the sequence:
Link to NCBI Protein BLAST