Transcript Information: S_Transcript_56722.p1


Annotated TAIR IDAT4G18240.1
Annotated Gene Namestarch synthase 4
Annotated Gene Symbol(s)ATSS4, SSIV, SS4
Annotation TypeOrtholog
Chromosome Positionchr4:10082221-10087044 | Forward length=1040
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.817017094722
Replicate 225.873252257811
Replicate 327.259349421276
Condition 2: 8 Hour
Replicate 117.357402614995
Replicate 218.65743865565
Replicate 318.631027105117
Condition 3: 24 Hour
Replicate 128.619298695216
Replicate 225.129149858507
Replicate 326.064383674371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56722.p1 GENE.S_Transcript_56722~~S_Transcript_56722.p1 ORF type:complete len:1048 (+),score=246.41,Glyco_transf_5|PF08323.7|1e-66,Glycos_transf_1|PF00534.16|7.2e+03,Glycos_transf_1|PF00534.16|6.5e-11,Tropomyosin_1|PF12718.3|29,Tropomyosin_1|PF12718.3|75,Tropomyosin_1|PF12718.3|4e-06 S_Transcript_56722:150-3293(+)
ATGGCGGCAAAGCTCACAACGTGTTTCCTAAGCCACGGTACTTGGATCGGATCGAGCTCCAATCACTCGAATATGCATTTCGCTGAGTTTTCTCACCACCATCGCTTCTTTTCTCCTTCTTGCAAAATGCGTCAGCGTAATCTCAGTTCTCAACACAAAAGACAGCTGGTAAAGAAAGTATCTCCTGAGAAGCCTCGGATAGATGCAAAATTGAAACCAAATGGTGAAGCAGAGGGGGACTCTGAGAGTGCCTTTGTCAATGGTGCCTCAAGTTCAAGACAGGATATTATACCCAACAATGATGTTGACAAAAGAATGGTAACTGAGCAAGTTGAGCAGAATAGCTTGGATGATTTGACAAAGGTACATGATGACATAGTTTTACTGCCTCCCCCACAAGTCAACAGTTCAACCATAATTGAACTAGATAGGAACAGTGTGCCATACAGTCATACACCCAGCAATGATCCTAAGAATTTGTCCATTGACTTAGTTGGTGGAGAGAAGCAAGCATCCATTCAGTTTGAGGATTTGATCACCATGATTAGAAATGCAGAGAGAAATGTCCTTCTACTCAATCAAGCTCGGGTTCGAGCCCTTAAAGATCTGGATACAATACTTCATGAGAAAGAAGCTTTGCAGGGAGAAATCAATGTCTTGGAGATGAAACTGGCAGAAACTGATGCAAAAATCAAACTTGCTGCACAGGAGAAGATACATGTTGAACTTCTTAAAGAACAGCTGGAGAACATGAGGAAAGAATTTTCTGAGAGGAGTGGGGCCCAGGGAGAGGTATATGAAATTTCTGGCTACGATATTCCTCAACCTCAATCATGGAACAGTGATTTATTACATCTAAGCAAGGAGCTTAGTTCACTGAAGGCAGAGAATATATCCTTGAAGGATGATATAAGAGCTCTTAAGGATGAACTTAGAAATGTTAATGAAACTGATGAACTGGTAGCTACCCTGGAGAAAGAGTGTCTGCTTTTAGAGGTTTCTGTGAAAGAATTGGAGTCCAAACTTCAAGCATCTCAGGAAGATGTGAATAAACTTTCTGCAATGAAACATGAATATAATACCTTGTGTGAGAAAGTCTTTAATTTACAGGCCTTGCTCAACAATGCAACCAAGCAAGCTGACCAAGCTATCTTAGTCTTGCATCAAAATCAGGAACTACGTAAGAAGGTGGAGAGGTTGGAAGAGTCTCTCACTGAAGCAAATGTCTACAAGTCATCGTCAGAGAAGTTGCAAAAATACAATGAATTAATGCAAGAAAAAATAAAGTTTTTGGAGGAGCGCCTTGAAAAGTCTGATGAAGAGATAAGCTCTTACATTCACTTGTACCAAGACTCTATGAAGGAATTCCATGACACACTTGATAATCTGAAACAAGAAAGCCAGAAAAGGGCTCCCAATGAACCAGTAGAGGATCTGCCTTGGGAATTTTGGAGTCAAATGCTGCTAAGAATTGATGGCTGGTTGCTTGAGAAAAAATTGCCAGCAAATGATGCAAAGATGTTGAGGGAAATGGTGTGGAAAAGAGAGCGCCGTATTTATGATGCATACATGGAATGTAAAGAAAAGACTGAACATGACTTGTTGGCTACATTCTTAAGTCTGACATCTTCACCTGCATGGTCAGCGTTACATGTTATTCACATTGCAGCAGAGATGGCACCAGTTGCAAAGGTTGGTGGTCTTGGAGATGTTGTGACGGGTCTTGGGAAGGCACTTCAGAAGAAAGGACACCTCATGGAAATTGTACTTCCGAAGTATGATTGTATGCAGTATGACCTCATTCATGACTTACGGGCTTTGGATGTGGAAGTAGAGTCATATTTTGATGGACACCTATTCAAGAACAAGATATGGGTCGGCACAGTTGAAGGTCTTCCTGTTTATTTTATTGAGCCCCATCATCCTGCTAAGTTCTTTTGGAGGGGACAGCTTTATGGAGAGAATGATGACTTCAAGAGGTTTTCATTTTTCAGCCGGGCAGCACTTGAATTGCTCCTTCAGTCTGGGAAGAAACCAGATATAATACATTGCCATGATTGGCAAACAGCTTTTGTGGCACCATTATACTGGGATCTCTATGCACCGAAAGGATTGAATTCAGCAAGGATTTGTTTTACGTGCCACAACTTTGAGTATCAAGGTGTTGCTCCAGCTCCAGAACTTGCTTCATGTGGTCTTGATGTTTATCAGCTCAATAGACCAGACAGGATGCAGGACAACTCAGCTGATGATAGGATTAATCCTGTCAAGGGTGCAGTTGTATTCTCCAACATTGTCACAACAGTTTCACCCACCTATGCCCAGGAAGTCCGAACCCCTGAGGGTGGAAGAGGCCTTCACACAACACTTAATTCTCACTCTAGAAAGTTCATAGGAGTTCTGAATGGCATTGATATTGATGCATGGAACCCTGCCACTGATTCATTTATTGATGTGCAATACAATTCAAGTGATCTTCAGGGTAAAAAAGCCAATAAGGGAGCTCTCAGGAAGCGTCTTGGGCTCTCTGACAGGGATACCAGGCAGCCACTGGTTGGTTGCATAACAAGGCTCGTTCCACAAAAGGGGGTCCATCTTATAAGACATGCTATATATCGAACACGAGAGCTTGGAGGGCAATTTGTACTTCTTGGGTCCAGTCCTGTGCCTCATATACAGAGGGAATTTGAGGGCATTGCAAGCCAGTTTCAGAATGAAGAAAATGTTCGATTGATATTGAAGTATGATGAGTTACTCTCCCGTTCCATTTATGCTGCATCTGATATATTCATCATCCCATCTATATTTGAGCCATGTGGGCTGACACAGATGATAGCAATGAGATATGGTTCAATACCCATTGCAAGAAAGACCGGTGGATTAAATGACAGTGTTTTTGATGTTGATGATGAAACGGTACCACTTCAGTTTCGGAATGGATTTACATTTTTTTCACCTGATGAACAGGGCTTAAACAGTGCTCTAGACCGTGCATTACGCTACTACATGAACAATAGAGAGAGTTGGGAGGAACTTGTTCAGAAGGTTATGCGCATGGATTTTAGCTGGGAATCTTCAGCCTCACAGTACGAGGAACTCTATGCCAGATCTGTAGCACGAGCAAGGGCAGCAAAACGTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56722.p1 GENE.S_Transcript_56722~~S_Transcript_56722.p1 ORF type:complete len:1048 (+),score=246.41,Glyco_transf_5|PF08323.7|1e-66,Glycos_transf_1|PF00534.16|7.2e+03,Glycos_transf_1|PF00534.16|6.5e-11,Tropomyosin_1|PF12718.3|29,Tropomyosin_1|PF12718.3|75,Tropomyosin_1|PF12718.3|4e-06 S_Transcript_56722:150-3293(+)
MAAKLTTCFLSHGTWIGSSSNHSNMHFAEFSHHHRFFSPSCKMRQRNLSSQHKRQLVKKVSPEKPRIDAKLKPNGEAEGDSESAFVNGASSSRQDIIPNNDVDKRMVTEQVEQNSLDDLTKVHDDIVLLPPPQVNSSTIIELDRNSVPYSHTPSNDPKNLSIDLVGGEKQASIQFEDLITMIRNAERNVLLLNQARVRALKDLDTILHEKEALQGEINVLEMKLAETDAKIKLAAQEKIHVELLKEQLENMRKEFSERSGAQGEVYEISGYDIPQPQSWNSDLLHLSKELSSLKAENISLKDDIRALKDELRNVNETDELVATLEKECLLLEVSVKELESKLQASQEDVNKLSAMKHEYNTLCEKVFNLQALLNNATKQADQAILVLHQNQELRKKVERLEESLTEANVYKSSSEKLQKYNELMQEKIKFLEERLEKSDEEISSYIHLYQDSMKEFHDTLDNLKQESQKRAPNEPVEDLPWEFWSQMLLRIDGWLLEKKLPANDAKMLREMVWKRERRIYDAYMECKEKTEHDLLATFLSLTSSPAWSALHVIHIAAEMAPVAKVGGLGDVVTGLGKALQKKGHLMEIVLPKYDCMQYDLIHDLRALDVEVESYFDGHLFKNKIWVGTVEGLPVYFIEPHHPAKFFWRGQLYGENDDFKRFSFFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGVAPAPELASCGLDVYQLNRPDRMQDNSADDRINPVKGAVVFSNIVTTVSPTYAQEVRTPEGGRGLHTTLNSHSRKFIGVLNGIDIDAWNPATDSFIDVQYNSSDLQGKKANKGALRKRLGLSDRDTRQPLVGCITRLVPQKGVHLIRHAIYRTRELGGQFVLLGSSPVPHIQREFEGIASQFQNEENVRLILKYDELLSRSIYAASDIFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDVDDETVPLQFRNGFTFFSPDEQGLNSALDRALRYYMNNRESWEELVQKVMRMDFSWESSASQYEELYARSVARARAAKRA*

Click here to download the sequence:
Link to NCBI Protein BLAST