Transcript Information: S_Transcript_56734.p1


Annotated TAIR IDAT5G64580.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25817391-25821465 | Reverse length=855
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.18615651326
Replicate 220.918981343127
Replicate 322.88344097009
Condition 2: 8 Hour
Replicate 127.246380025001
Replicate 230.284472524975
Replicate 330.328423723677
Condition 3: 24 Hour
Replicate 119.856697089953
Replicate 219.948331848306
Replicate 320.253185426689


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56734.p1 GENE.S_Transcript_56734~~S_Transcript_56734.p1 ORF type:complete len:868 (+),score=188.48,AAA|PF00004.25|1.3e+04,AAA|PF00004.25|1.5e-40,RuvB_N|PF05496.8|2.1e-06,RuvB_N|PF05496.8|2.2e+03 S_Transcript_56734:103-2706(+)
ATGGTGTCAATGGCAACCAACATTTGCACAAACTTTGATCTCATTTCACCCACAAAAACCCAAATACTAAAACCCCATAACCCCACTTCTTCTTCTTTAAGGGTCCTCTTCAAAGCTCCCAACTTTTGCACTAATAACCCCTTTCATGGTCTCTCATACAAGTCCAAAAGGGTCAAATTTAGGACCCTTTGTAGCTCTGAACAGGTTTTGACATCTTCCCAAAACAAACAAGGAGATGAATTACAACAACAGCAACAACAAGTAGATGAAGAAGAAGATGCTGAAGCTGCACAATTATTTGAGAAATTAAGGGATGCTGAAAGAAAAAGGATAGAGAAGCAGGAAGAGTTTGAAAACAAAGCAAATGTACAGTTGGAGAGGCAGCTTGTGATGGCATCAGAATGGAGCAGGAAATTGTTGACTATGCGTGGGAAATTGAAGGGAACTGAGTGGGATCCTGAAACTTCACACCCAATCAGCTATAGTGATTTTTGGAAGCTCTTGAACTCAAATAATGTCCAATATATGGAGTACTCAAATTTTGGCCAGACAATATCAGTGATACTGCCGTACTACAAAGATGGGATGGTAAAAGGCAAAGGGTCAAACGGAAATTCAAAGGATATTGTCTTTAAGCGCCACATAGTTGACCAAATGCCAATTGACTGTTGGAATGATGTTTGGGGGAAGTTGCATCAGCAGTTGGTGAATGTTGATGTGATTAATGTCAACCCAGTGCGTGCAGAAGTCTATTCTTCTGTTGCTACAGCTGTTGTATGGTCTATGAGACTAGCCCTTGCGATAGGGTTATATGTTTGGATTGACAGCGTTATGAGGCCAATTTATGCAAAGTTAATTCCTAGCGATTTGGGGAAACCTAGCAAAAAGGCAAGGGAGCCACTTAAGCGCCGTGCATTGGGATCACTGGGGAAGAGTCGGGCGAAATTCATTTCAGCAGAAGAACGAACTGGCATTACCTTCGACGACTTTGCTGGCCAAGAGTATATAAAACGAGAATTGCAAGAGATTGTCAGGATTTTGAAAAATGAAGAAGAGTTTCAAAATAAGGGCATATATTGCCCCAAGGGTGTGTTACTTCATGGTCCTCCTGGAACTGGTAAAACACTGTTAGCGAAAGCTATCGCTGGGGAGGCAGGACTACCCTTTTTCGCTGCTAATGGAACCGATTTCGTTGAGATGTTTGTTGGTGTTGCAGCATCTCGTGTGAAGGACCTTTTTGCTAGTGCAAGATCATTTGCTCCTTCTATCATCTTTATTGATGAGATAGATGCTATTGGTAGCAAGCGAGGTGGCCCTGATATTGGAGGTGGAGGGGCAGAAAGAGAACAAGGTCTGCTTCAAATATTGACCGAGATGGATGGGTTTAAAGTTTCCACATCACAGGTGTTAGTCATTGGAGCAACCAACCGACTTGATATCCTTGATCCGGCCTTGCTGAGAAAGGGAAGATTTGACAAGATCATAAGAGTTGGTTTGCCTTCCAAAGATGGCAGGTATGCCATATTGAAGGTACACGCAAGGAATAAGTTTTTTAGTTCAGAAGGGGAAAAAGAAGTACTACTACAAGAAGTTGCAGAGCTGACAGAAGATTTTACAGGAGCAGAGCTCCAGAATATACTTAATGAGGCTGGTATTTTGACTGCCAGGAAAGACAAGGACTATATTGGCAGAGAAGAACTGCTAGAGGCCTTGAAGAGACAAAAAGGAACATTTGAAACAGGACAAGAAGATAGCAAGGAAATTCCAGAGGAGTTGAAGCTGAGATTAGCGTATAGGGAAGCAGCTGTTACTGTCCTTGCTTGTTATTTTCCTGACCCATACCGTCCTTTTGTTGAGACCAACATAAATTCAATAAGCAGCCATCCTAATATGCGTTATGCTGAGATTTCTGGCAGGGTTTTCTTTAGGAAGTTGGACTATGTTAACTCAATTGTGCGTGCTTGTGCTCCTAGGGTAATTGAAGAGGAGATATTTGGGGTTGACAATTTGTGCTGGATTTCTTCAAAAGCTACTCTTGAAGCTTCTCGGTTGACAGAATTTTTGATATTGCAGACTGGGATGACGGCTTTTGGGAAGGCAAATTATAGGAATGCACGGGATCTTGTCCCAAATCTAGCTGCCAAACTTGAAGCAATAAGGGATGAATACATGCGATTTGCTCTTGAAAAATGTTCTTCAGTCCTGAGGGAACACCGTGCAGCTGTTGAGACAATTACAGATGAACTTCTTGACAACGGAGACATTAAGGCTGAAGAAATATGGGAGATATATAAAAGTTCTCCTCGATTAAGTCAGCCCGCTGTTAATGCTGTCGATGAATATGGTGCATTAATCTATGCTGGAAGATGGGGCATTCATGGTATCAGTTGTCCAGGAAGGGTTACTTTCGCACCTGGTAATGTAGGATTTTCAACGTTTGGTGCACCTCGTCCAATGGAGACTCAAGTAGTTAGTGATGAAACGTGGAAGCTAGTAGATGATATCTGGGATAAAAGGGTTCAGGAAATCAGAAATGAGGTCTCAAAAGAAGTTGAAGAAGAGGAGGAGAGGCCACAGCTCTTGATGGCCAGCCATTTCCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56734.p1 GENE.S_Transcript_56734~~S_Transcript_56734.p1 ORF type:complete len:868 (+),score=188.48,AAA|PF00004.25|1.3e+04,AAA|PF00004.25|1.5e-40,RuvB_N|PF05496.8|2.1e-06,RuvB_N|PF05496.8|2.2e+03 S_Transcript_56734:103-2706(+)
MVSMATNICTNFDLISPTKTQILKPHNPTSSSLRVLFKAPNFCTNNPFHGLSYKSKRVKFRTLCSSEQVLTSSQNKQGDELQQQQQQVDEEEDAEAAQLFEKLRDAERKRIEKQEEFENKANVQLERQLVMASEWSRKLLTMRGKLKGTEWDPETSHPISYSDFWKLLNSNNVQYMEYSNFGQTISVILPYYKDGMVKGKGSNGNSKDIVFKRHIVDQMPIDCWNDVWGKLHQQLVNVDVINVNPVRAEVYSSVATAVVWSMRLALAIGLYVWIDSVMRPIYAKLIPSDLGKPSKKAREPLKRRALGSLGKSRAKFISAEERTGITFDDFAGQEYIKRELQEIVRILKNEEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVSTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRYAILKVHARNKFFSSEGEKEVLLQEVAELTEDFTGAELQNILNEAGILTARKDKDYIGREELLEALKRQKGTFETGQEDSKEIPEELKLRLAYREAAVTVLACYFPDPYRPFVETNINSISSHPNMRYAEISGRVFFRKLDYVNSIVRACAPRVIEEEIFGVDNLCWISSKATLEASRLTEFLILQTGMTAFGKANYRNARDLVPNLAAKLEAIRDEYMRFALEKCSSVLREHRAAVETITDELLDNGDIKAEEIWEIYKSSPRLSQPAVNAVDEYGALIYAGRWGIHGISCPGRVTFAPGNVGFSTFGAPRPMETQVVSDETWKLVDDIWDKRVQEIRNEVSKEVEEEEERPQLLMASHFL*

Click here to download the sequence:
Link to NCBI Protein BLAST