Transcript Information: S_Transcript_56748.p1


Annotated TAIR IDAT5G28500.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in 49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:10477810-10479114 | Forward length=434
E-Value1.8E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 182.1171594533
Replicate 293.745393761892
Replicate 398.385179652204
Condition 2: 8 Hour
Replicate 1177.98817988424
Replicate 2165.83023991704
Replicate 3171.60501437629
Condition 3: 24 Hour
Replicate 187.549533055689
Replicate 290.390688193603
Replicate 395.686744338476


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56748.p1 GENE.S_Transcript_56748~~S_Transcript_56748.p1 ORF type:5prime_partial len:257 (+),score=58.35 S_Transcript_56748:3-773(+)
ATACATTCATATCCATCTACCAGAAAAACCAGTAGGAGAAACCCAAACTCCTCCATAACTGAAAAACCTCAAAACATGCTCTCCCTTTCATCCCCAAAACCCCTTTCCCTTTCTTCTTCCACCACAAACACCTTCCTTTCACCTCTCTCAATCCCTTCACTTTCCTTGTTCACTCCCACAAAAACTCCCACTTCAATCATATCCTCCTCTTCTTTGAGCTCAAACCCCCCACCTCTAGTCCCAAACCTCATCATCCCAAAAAACTCTTCACCAACCCCAACTCCCCAAAACCTATACCAGCCATACCGGCCTCCTCAATCCCCTCCCCCTCAGAAATACAAGAACCTTGACACTGCCTCCATCATTGAAGTCCTTTCCAACAGACTAGGACTCTGGTTTGAATATGCTCCTCTAATATCAACCCTCTTTCGCGACGGTTTTACTCCTCCTTCTATTGAGGAACTCACTGGTATCTCCGGGGTTGAACAAAACCGCCTTGTTGTTGGTGCCCAAGTCAGGGAATCCATTGCTGAGTCCCCTGGCATTGATCCTCAGGTTCTTGCATATTTTGACAGTGGTGGCTCTGAGATTCCTTATGAACTTAGGCTACTTAATGCCTCTCAAAGAGCTGCCGCTGCTACTTATGTTGTGAATAATAAGCTTGATGGTGAAAAGGCTAGGGACATTGCTAGAGCTATCAAGGATTTCCCTTCAAGGCAATTGGTTCCTTGTTGGTCTAAGTTTGATTACACTGAGCCTGGGGATTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56748.p1 GENE.S_Transcript_56748~~S_Transcript_56748.p1 ORF type:5prime_partial len:257 (+),score=58.35 S_Transcript_56748:3-773(+)
IHSYPSTRKTSRRNPNSSITEKPQNMLSLSSPKPLSLSSSTTNTFLSPLSIPSLSLFTPTKTPTSIISSSSLSSNPPPLVPNLIIPKNSSPTPTPQNLYQPYRPPQSPPPQKYKNLDTASIIEVLSNRLGLWFEYAPLISTLFRDGFTPPSIEELTGISGVEQNRLVVGAQVRESIAESPGIDPQVLAYFDSGGSEIPYELRLLNASQRAAAATYVVNNKLDGEKARDIARAIKDFPSRQLVPCWSKFDYTEPGDC*

Click here to download the sequence:
Link to NCBI Protein BLAST