Transcript Information: S_Transcript_56748.p2


Annotated TAIR IDAT3G04550.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1225961-1227310 | Forward length=449
E-Value2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 180.887791931558
Replicate 280.860667146754
Replicate 380.312210334497
Condition 2: 8 Hour
Replicate 1147.49186209485
Replicate 2146.4639745921
Replicate 3145.1157703945
Condition 3: 24 Hour
Replicate 178.017441037836
Replicate 283.956582785287
Replicate 379.642021988569


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56748.p2 GENE.S_Transcript_56748~~S_Transcript_56748.p2 ORF type:complete len:203 (+),score=64.54 S_Transcript_56748:843-1451(+)
ATGGCGTTGGAGGTGGCAGAGACGGAGGAGGCGAAGGCGGCTGTGAAGGAGGAGATGGAGGGACTAAAGGATAAAGAAGAGGAGGTCATGAAGGATGACGGGGTGAGAGTTCCTATAGTGAGGCTACAAATGGGGGAGGTGGCGGAGGCGACATCGGTGGTGGTGCTGCCGGTTTGCAAGGCGGAGGAGAGGGAGGACGGGTTGGCGAGGGCGCCTTTCGAGTGTAGGAGTGTAGGGGAGTTTGGTGTGGTGGTTGCAGAGAAAGGGTGGAATAGCTGGGTGGTACTGCCTAAATGGCTTCCTATTGCAGGTATGGGACCAGGGGGTGTTGCAGTGGCCTTTCCTAATGACAGGGTGCTGCCATGGAGGGTGAACAGTGGCCACAAGGAGCCGCTCTTGGTGGTGGCTGACCGGACAAGGACGGAGGTTCGAGCTAATGAGGGGTTTTACTTGGTGGTCGATGGTGGTAGGGAAGGAAAGTTGAAGGTAGGGAGGGGTTCAGCATTGAAAGAAAAGGGGGTGAATCAAAGTTTAGGGACTGTGATTGTTGTGGTTAGGCCACCAAGAGATGAAGCCGATGATCAATTGAGTGATGAAGATTGGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56748.p2 GENE.S_Transcript_56748~~S_Transcript_56748.p2 ORF type:complete len:203 (+),score=64.54 S_Transcript_56748:843-1451(+)
MALEVAETEEAKAAVKEEMEGLKDKEEEVMKDDGVRVPIVRLQMGEVAEATSVVVLPVCKAEEREDGLARAPFECRSVGEFGVVVAEKGWNSWVVLPKWLPIAGMGPGGVAVAFPNDRVLPWRVNSGHKEPLLVVADRTRTEVRANEGFYLVVDGGREGKLKVGRGSALKEKGVNQSLGTVIVVVRPPRDEADDQLSDEDWD*

Click here to download the sequence:
Link to NCBI Protein BLAST