Transcript Information: S_Transcript_56812.p1


Annotated TAIR IDAT4G24580.1
Annotated Gene NameRho GTPase activation protein (RhoGAP) with PH domain
Annotated Gene Symbol(s)REN1
Annotation TypeOrtholog
Chromosome Positionchr4:12687879-12694248 | Reverse length=933
E-Value2.1E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1724898967494
Replicate 22.5300380639327
Replicate 31.9894496649948
Condition 2: 8 Hour
Replicate 11.865194488379
Replicate 22.3915484454518
Replicate 32.5893886789336
Condition 3: 24 Hour
Replicate 12.0804650943423
Replicate 22.643010096367
Replicate 32.1079648385228


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56812.p1 GENE.S_Transcript_56812~~S_Transcript_56812.p1 ORF type:3prime_partial len:1029 (+),score=274.64,RhoGAP|PF00620.23|7.2e-28,Lzipper-MIP1|PF14389.2|1.1e+03,Lzipper-MIP1|PF14389.2|2.2e+03,Lzipper-MIP1|PF14389.2|5.3e-15,Lzipper-MIP1|PF14389.2|1.5e+04,PH|PF00169.25|2.2e-12 S_Transcript_56812:372-3455(+)
ATGACGACCAAAACTAACGATTCTTCCTCCCAGCCACTATCTCAAGGAGAGAATGCTGGCATTGCTCCACCTCAATCAGGACCACCTGAGCATCAGACCTCTCGAAACCGCAATCAGGTTTTCAAGAGTGGCCCCCTATATCTTTCATCCAAAGGAATTGGATGGACATCGTGGAAGAAAAGATGGTTTATTCTGACACGTACATCTTTGGTCTTTTTCAGAAGTGATCCTAGCGCGGCTCCTCAAAAAGGAAATGAGATGAATCTAACCCTTGGTGGCATTGATCTCAACAACTCTGCGAGTGTCGAAGTGAAGGTGGACAAAAAGTTATTGACAGTGTTCTTTCCTGATGGTCGTGATGGACGTGCTTTCACACTCAAGGCTGAAACTTTGGAGGATCTACATGAATGGAAGACTGCACTAGAGAATGCCTTGGCCCAGGCACCAAGTGCGACTCATGCCGCTGGACAAAATGGGATTCTTAAAAGTGAGCAGGTGGATGGAGCTAATGGCTCTGCTGATCAACAGAAAGATAGGCCGCCTATCAAATCTATGGTCATTGGACGACCCATTTTACTTGCTTTGGAAGATATAGACGGATCACCTTCTTTCTTGGAGAAAGCTCTCAAATTCATTGAAGACTATGGAGTCAAGGTAGAAGGGATTTTACGACAAGCGGCTGATGTTGAAGAAGTTCACCGTCGTGTGCGCGAATATGAACAGGGTAAAACTGAGTTCTCTCCAGAAGAGGATCCACATGTCATTGCAGATTGTGTGAAGTACATCTTGAGAGAATTACCATCTTCTCCAGTTCCAGCATCTTGTTGTACTGCACTACTAGAAGCATTTCGAAGTGACCGCAACAATAGGCTTAATGCCATGCGAACAGCAATACTAGAAACGTTTCCAGAGCCTAATAGACGGTTACTGCAAAGGATTCTCATGATGATGCAAAGTGTGGCTTCCCATAAATTGGAAAATCGGATGAGCGTGTCAGCTGTGGCAGCTTGCATGTCCCCTTTGCTTCTACGCCCACTTCTTGCTGGTGATTGTGAACTTGAAAATACGCACATGGATGTCGCTGGTGATGGGTCTCTTCAGTTACTTCAAGCAGCTGCTGCAGCAAATCACGCTCAGGCTATAATCATCACTCTACTAGAGGAGTATGATAACATATTTGGGGAAGGTTCAATGTCACCTGAATTATTCTCAGACTCAGATGAGAGCGGAAGTGGGACAGAGGAGGCTACTGATGATGATGACATGTATGAGGAGGATGATGATGAGGAGGAGGAGGAGGGATCAGATGATGAGGAAGCATCAGATGACCATGATGCAGAAACAGATGATGATTATGAACATTCAGTAACTGAGACATGTAGTGACAGTGGTGACCATGAGGAGAGCAACTCTAATGATGACAAGCAAAGTGAAAGGTCCAGCTCATTTTCCAAGTCCCCAGAAAGAGTTGACCATTTAGCAAAGAGGTCGCCATCAGCTTCACCTCGTACATCAGCACCTCAAAACAATAATGTGAAGAGTAGTGATAATACAATGAAGCAAGTGAAAGATACTCCTATATCAGTGACTGAAATTGCTGACTCTACTAAATCGCATAGAGATATTCCAGCAGAGACGAGTTCAGTAAATGAAACAGTTAGTTTTAGTTCAGAATTAGGCAGTCAATTGTCCACAACTAAGTTCCTCGGGTGCTCACAAGCCAGACGTCCAAGGTGGGGACGAACATCGGCCAAGAAAAATCTTTCCATGGAATCCATTGACTTTTCAGTTGAAGATGATGAGGATGAAATTGAAAGGCTGGAGGCAGCAAAGATTGAGCTGCAAAATCGAATTGCAGAAGAGGCTAATGGAAATGCAAAACTGCAAGCAAGTTTGGAGAGACGAAAGAAGGCCTTACATGAGCGCCGATTGGCTCTTGAGAATGATGTGGCTAGGTTACAGGAACAGTTGCAGAAGGAAAGAGAATTACGGGCAGCTCTAGAATCTGGAATCAGCACCTCTCAAGTTCCTGGTGCAGCAGGTGTTGATGAAAAGATGAAGGCTGAGCTTGAGGAAATTGCTTTAGCAGAAGAGAATTTTAATAGCTTGAAACATAGGCTAGATGACCTTGGAGCAGAGCTTAATCGTCAACATGAAAGAAATAGAGCTCTTATGCAGGATAGATCCACAAGACTACAAGAAACCTCAAGTCAAGGAACAATGCCGCTAAATAATAAGGACAAAGAGACCAAAGATAATTTATATCAAGTTGAAAGGTCAAGTAGAATCGAGGGACAAAGGAATTATCACATGGATGGAGCTGATCGTGATAATGATTGGAAAAACGAAACATCATCTTTGTCAAACAAAAGTCAAAACCAGACAAATGATACAGCACGAGCTGGCAGTTCCAAATTTGCATGGCTTCAAAGCAATTCATCTTCATCACCATCCCAGGAAGCCTCTGTTCCCAAACCTACGTCCTCTGCATCCAGGAAGTCCGGTAAGAGCGAGACAACTTCTGCACTGTCCAAATTGACAACCCGGCTCAACTTCTTGAAAGAGAGACGTAATCAAATTGCTAATGAGCTCCAAAACATAGATAAAGGCCGAGGATCACCAATTCCAAGCCCCGGGAAGGGCAAAGCTCCAGAACCACTCCATATAGTGCACAACATAGATAAGACTCAAGGTCCAGAGGGTAACTTTGTCCAGAACAAGGAAGACCTCTCTCATCAATTGTCTCATAGTTCCAGCAAGGGGACATCAACAGGGTTTGATAACGAGGATGGTAACAGAAGGGGCGACAACAAGGATGGTAACAGTAAGGGCGACAACAAGGATGGTAACAGAAAGGGCGACAACAAGGATGGTAACAGAAAGAGCGACAACAAGGATGGTAATAAAAAGGGTGACAACAAGGATGGTAACAGAAAGGGCGACAACAAGGATGGCAAACATAAGGGAGATAACAGGGATGGTAAAAATAAGGGTGATAACAAGGATGGTAAACAAAAGGGCGATAACAAGGATGACAACAGAAAGGGCGATAACAAAGATGATAACAAGAAGGGTTCTAGTTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56812.p1 GENE.S_Transcript_56812~~S_Transcript_56812.p1 ORF type:3prime_partial len:1029 (+),score=274.64,RhoGAP|PF00620.23|7.2e-28,Lzipper-MIP1|PF14389.2|1.1e+03,Lzipper-MIP1|PF14389.2|2.2e+03,Lzipper-MIP1|PF14389.2|5.3e-15,Lzipper-MIP1|PF14389.2|1.5e+04,PH|PF00169.25|2.2e-12 S_Transcript_56812:372-3455(+)
MTTKTNDSSSQPLSQGENAGIAPPQSGPPEHQTSRNRNQVFKSGPLYLSSKGIGWTSWKKRWFILTRTSLVFFRSDPSAAPQKGNEMNLTLGGIDLNNSASVEVKVDKKLLTVFFPDGRDGRAFTLKAETLEDLHEWKTALENALAQAPSATHAAGQNGILKSEQVDGANGSADQQKDRPPIKSMVIGRPILLALEDIDGSPSFLEKALKFIEDYGVKVEGILRQAADVEEVHRRVREYEQGKTEFSPEEDPHVIADCVKYILRELPSSPVPASCCTALLEAFRSDRNNRLNAMRTAILETFPEPNRRLLQRILMMMQSVASHKLENRMSVSAVAACMSPLLLRPLLAGDCELENTHMDVAGDGSLQLLQAAAAANHAQAIIITLLEEYDNIFGEGSMSPELFSDSDESGSGTEEATDDDDMYEEDDDEEEEEGSDDEEASDDHDAETDDDYEHSVTETCSDSGDHEESNSNDDKQSERSSSFSKSPERVDHLAKRSPSASPRTSAPQNNNVKSSDNTMKQVKDTPISVTEIADSTKSHRDIPAETSSVNETVSFSSELGSQLSTTKFLGCSQARRPRWGRTSAKKNLSMESIDFSVEDDEDEIERLEAAKIELQNRIAEEANGNAKLQASLERRKKALHERRLALENDVARLQEQLQKERELRAALESGISTSQVPGAAGVDEKMKAELEEIALAEENFNSLKHRLDDLGAELNRQHERNRALMQDRSTRLQETSSQGTMPLNNKDKETKDNLYQVERSSRIEGQRNYHMDGADRDNDWKNETSSLSNKSQNQTNDTARAGSSKFAWLQSNSSSSPSQEASVPKPTSSASRKSGKSETTSALSKLTTRLNFLKERRNQIANELQNIDKGRGSPIPSPGKGKAPEPLHIVHNIDKTQGPEGNFVQNKEDLSHQLSHSSSKGTSTGFDNEDGNRRGDNKDGNSKGDNKDGNRKGDNKDGNRKSDNKDGNKKGDNKDGNRKGDNKDGKHKGDNRDGKNKGDNKDGKQKGDNKDDNRKGDNKDDNKKGSSS

Click here to download the sequence:
Link to NCBI Protein BLAST